RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CA12O43570 354 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 SNAPC5O75971 98 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 LBX1P52954 281 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 MC2RQ01718 297 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 ABHD18Q0P651 414 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 ZNF678Q5SXM1 525 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 PNPLA1Q8N8W4 532 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 OR4M2Q8NGB6 313 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 DCUN1D4Q92564 292 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 KLHDC7BQ96G42 594 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 POLDIP3Q9BY77 421 aaKnown RBP13.36□□□□□ -0.27
SPG11-210ENST00000558319 HSD3B7Q9H2F3 369 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 ADAMTS10Q9H324 1103 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 KCNK12Q9HB15 430 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 Q9N2J8 555 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 LSM5Q9Y4Y9 91 aaKnown RBP13.36□□□□□ -0.27
SPG11-210ENST00000558319 HSBP1L1C9JCN9 74 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 H0YAE9 185 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 PEX14O75381 377 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 IFNA10P01566 189 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 CSF2RAP15509 400 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 HNRNPKP61978 463 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPG11-210ENST00000558319 PLEKHN1Q494U1 663 aaPredicted RBP13.36□□□□□ -0.27
SPG11-210ENST00000558319 CNKSR3Q6P9H4 555 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 ELMOD3Q96FG2 381 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 FCRL5Q96RD9 977 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 SYNPO2LQ9H987 977 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 EPHA6Q9UF33 1036 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 KRBA1A5PL33 1030 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 SULT1B1O43704 296 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 SORBS2O94875 1100 aaKnown RBP13.36□□□□□ -0.27
SPG11-210ENST00000558319 ARHGAP1Q07960 439 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 DPYSL2Q16555 572 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 PRR22Q8IZ63 422 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 SAMD14Q8IZD0 417 aaPredicted RBP13.36□□□□□ -0.27
SPG11-210ENST00000558319 EPYCQ99645 322 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 SMOXQ9NWM0 555 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 IGLON5A6NGN9 336 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 GRID2O43424 1007 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 ABRAXAS2Q15018 415 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 C2orf76Q3KRA6 126 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 OR2AP1Q8NGE2 309 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 MCHR1Q99705 422 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 POM121CA8CG34 1229 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 K7EPK0 472 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 SYNGR4O95473 234 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 TFP02787 698 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 FRKP42685 505 aaPredicted RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 DCST2Q5T1A1 773 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 PIWIL3Q7Z3Z3 882 aaKnown RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 FAM71E2Q8N5Q1 922 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 TMEM185AQ8NFB2 350 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 THAP4Q8WY91 577 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 FOXN4Q96NZ1 517 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 CACNG6Q9BXT2 260 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 FN3KQ9H479 309 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 PCYT1BQ9Y5K3 369 aaPredicted RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 SSTR2P30874 369 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 NFATC3Q12968 1075 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 SCGB2A2Q13296 93 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 HES5Q5TA89 166 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 ENPP6Q6UWR7 440 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 Q6ZVL8 140 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 LINC00471Q8N535 108 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 OR51A7Q8NH64 312 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 DPH2Q9BQC3 489 aaPredicted RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 PCDHB16Q9NRJ7 776 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 KCMF1Q9P0J7 381 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 PIP5K1CO60331 668 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 PRSS56P0CW18 603 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 APEHP13798 732 aaKnown RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 TMEM115Q12893 351 aaPredicted RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 BTN1A1Q13410 526 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 PNCKQ6P2M8 343 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 TXNDC5Q8NBS9 432 aaKnown RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 ELP5Q8TE02 316 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 PAAF1Q9BRP4 392 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 NELFAQ9H3P2 528 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 ROBO1Q9Y6N7 1651 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 FGF3P11487 239 aaPredicted RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 MAOBP27338 520 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 HTR7P34969 479 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 GPRC6AQ5T6X5 926 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 LRFN4Q6PJG9 635 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 FOLH1BQ9HBA9 442 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 ANKRD66B4E2M5 251 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 GMDSO60547 372 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 RAD51DO75771 328 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 BEST1O76090 585 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 RHOP08100 348 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 HADHBP55084 474 aaKnown RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 PRMT2P55345 433 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms