RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 OR4K14Q8NGD5 310 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 DIO2Q92813 273 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 FRG2BQ96QU4 278 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 NOL11Q9H8H0 719 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 SEMA4BQ9NPR2 832 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 NMRK1Q9NWW6 199 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 ADAM29Q9UKF5 820 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 PSME2Q9UL46 239 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 EDARQ9UNE0 448 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 LIPGQ9Y5X9 500 aa12.53□□□□□ -0.4
SNRPA1-204ENST00000558020 EML6Q6ZMW3 1958 aa12.52□□□□□ -0.4
SNRPA1-204ENST00000558020 A0A0G2JNJ9 132 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 HSPB2A8KAH6 182 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 AHRRA9YTQ3 701 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 TMPRSS11DO60235 418 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 CDH16O75309 829 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 ZWINTO95229 277 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 NADKO95544 446 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 CELA3AP09093 270 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 COL6A2P12110 1019 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 KRT15P19012 456 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 SERPINB9P50453 376 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 SLC7A5Q01650 507 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 EBPQ15125 230 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 HSPB2Q16082 182 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 NTRK2Q16620 822 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 TSNAXIP1Q2TAA8 658 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 CCNYL2Q5T2Q4 361 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 SPNS3Q6ZMD2 512 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 TMEM200AQ86VY9 491 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 GALNT12Q8IXK2 581 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 OR7G1Q8NGA0 311 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 OR10G3Q8NGC4 313 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 NEIL3Q8TAT5 605 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 WDR20Q8TBZ3 569 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 TRPC4APQ8TEL6 797 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF597Q96LX8 424 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 GPR78Q96P69 363 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 SECISBP2Q96T21 854 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 NTMT1Q9BV86 223 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF703Q9H7S9 590 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 CXorf21Q9HAI6 301 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 TNFRSF10DQ9UBN6 386 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 Q9UFV3 132 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 NPFFR2Q9Y5X5 522 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 CHCHD2Q9Y6H1 151 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 HCFC1P51610 2035 aa12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 INTS1Q8N201 2190 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-204ENST00000558020 ESYT3A0FGR9 886 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 HMX2A2RU54 273 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 LRRC14BA6NHZ5 514 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 GOLGA6L10A6NI86 522 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 WASHC1A8K0Z3 465 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 STX16-NPEPL1H3BU86 382 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 STX16O14662 325 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 PGRMC2O15173 223 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 PRKRAO75569 313 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 TRAPPC6AO75865 159 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 KRT38O76015 456 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 AIFM1O95831 613 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 GBAP04062 536 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 ALDOAP04075 364 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 KLK1P06870 262 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 RFPL3SP0C7P2 107 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 CD1EP15812 388 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 CNTFP26441 200 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 GDF1P27539 372 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 XKP51811 444 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 RPS6KA2Q15349 733 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 RIPPLY2Q5TAB7 128 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 RTL6Q6ICC9 239 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 LYPD8Q6UX82 237 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 MILR1Q7Z6M3 343 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 RELL1Q8IUW5 271 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 PM20D2Q8IYS1 436 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 PTGR2Q8N8N7 351 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 PHF21BQ96EK2 531 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 LRRC1Q9BTT6 524 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF717Q9BY31 904 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 ELOVL6Q9H5J4 265 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 ZDHHC18Q9NUE0 388 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 CFL2Q9Y281 166 aa12.51□□□□□ -0.41
SNRPA1-204ENST00000558020 F8P00451 2351 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 C15orf38-AP3S2A0A0A6YYH1 394 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 OR7A17O14581 309 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 DVL2O14641 736 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 OTCP00480 354 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 PORP16435 677 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 NAGAP17050 411 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 SSTR4P31391 388 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 GCKP35557 465 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 MASP1P48740 699 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 MAPK12P53778 367 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 FUT7Q11130 342 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 TECRLQ5HYJ1 363 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms