RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CARD18P57730 90 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TSPAN5P62079 268 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RELAQ04206 551 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 GPR50Q13585 617 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TSTA3Q13630 321 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC57Q2TAC2 916 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KLHL38Q2WGJ6 581 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC23Q53EV4 343 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CMPK2Q5EBM0 449 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MARCH8Q5T0T0 291 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RUSC1-AS1Q66K80 236 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TCEAL6Q6IPX3 200 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PRMT9Q6P2P2 845 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TTC23LQ6PF05 361 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CWC27Q6UX04 472 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 GSG1LQ6UXU4 331 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CEACAM20Q6UY09 585 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 C3P1Q6ZMU1 363 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 BTN2A1Q7KYR7 527 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TRMT1LQ7Z2T5 733 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 C17orf64Q86WR6 236 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ERICH1Q86X53 443 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 APCDD1Q8J025 514 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 LINC00518Q8N0U6 118 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TTC5Q8N0Z6 440 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 UXS1Q8NBZ7 420 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TRPV1Q8NER1 839 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 OR10V1Q8NGI7 309 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 USP28Q96RU2 1077 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 NKX3-1Q99801 234 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SPXQ9BT56 116 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 THAP9Q9H5L6 903 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 C5orf66Q9H5L9 145 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 INTS9Q9NV88 658 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PKD2L2Q9NZM6 624 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CNIH4Q9P003 139 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TAAR2Q9P1P5 351 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 VPS54Q9P1Q0 977 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 UXTQ9UBK9 157 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 COMMD3-BMI1R4GMX3 469 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PSME4Q14997 1843 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 KIF1AQ12756 1690 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CAMTA1Q9Y6Y1 1673 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CAMSAP2Q08AD1 1489 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 WDR7Q9Y4E6 1490 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 A0A087X0K7 114 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ANTXRLA6NF34 631 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MFSD2BA6NFX1 497 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MIF4GDA9UHW6 222 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 GOLGA8MH3BSY2 632 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF263O14978 683 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 STX10O60499 249 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 NDUFS6O75380 124 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CRCPO75575 148 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 IGLV1-44P01699 117 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ATP1A1P05023 1023 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ATP1B1P05026 303 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 HMGN1P05114 100 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 IQCF3P0C7M6 154 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ITIH1P19827 911 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CRABP2P29373 138 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 GDI1P31150 447 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 OR3A2P47893 321 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 LEPRP48357 1165 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 HCAR3P49019 387 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ACADVLP49748 655 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 NR0B1P51843 470 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CRIP2P52943 208 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 VCPP55072 806 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CASP9P55211 416 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CDH4P55283 916 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MAP3K7CLP57077 242 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TRA2BP62995 288 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TEFQ10587 303 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RIGQ13278 110 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SNCBQ16143 134 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 EXT1Q16394 746 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 XKR4Q5GH76 650 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CASC4Q6P4E1 433 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 OLFM4Q6UX06 510 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CD300LGQ6UXG3 332 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 BZW1Q7L1Q6 419 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 LUZP1Q86V48 1076 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CFAP206Q8IYR0 622 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SYCP3Q8IZU3 236 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CLYBLQ8N0X4 340 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 PYROXD2Q8N2H3 581 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ARHGAP18Q8N392 663 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZCCHC7Q8N3Z6 543 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CCNYL1Q8N7R7 359 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF321PQ8N8H1 164 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 RTL3Q8N8U3 475 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 DNAAF3Q8N9W5 541 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SIDT2Q8NBJ9 832 aaKnown RBP1.49□□□□□ -2.17
HIF1A-212ENST00000557538 TRPV3Q8NET8 790 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CLHC1Q8NHS4 586 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 CD99L2Q8TCZ2 262 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 MRGPRDQ8TDS7 321 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 SLCO2A1Q92959 643 aa1.49□□□□□ -2.17
HIF1A-212ENST00000557538 ST6GALNAC6Q969X2 333 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms