RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ENDOUP21128 410 aaKnown RBP14.61□□□□□ -0.07
TUBB3-213ENST00000557262 PIK3R1P27986 724 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 EBPQ15125 230 aaKnown RBP14.61□□□□□ -0.07
TUBB3-213ENST00000557262 NTRK2Q16620 822 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 TECRLQ5HYJ1 363 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 TMEM198Q66K66 360 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 PLD6Q8N2A8 252 aaKnown RBP14.61□□□□□ -0.07
TUBB3-213ENST00000557262 MYRIPQ8NFW9 859 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 JSRP1Q96MG2 331 aaPredicted RBP14.61□□□□□ -0.07
TUBB3-213ENST00000557262 NTMT1Q9BV86 223 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 ACSS3Q9H6R3 686 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 ZNF703Q9H7S9 590 aaPredicted RBP14.61□□□□□ -0.07
TUBB3-213ENST00000557262 CXorf21Q9HAI6 301 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 AHSPQ9NZD4 102 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 SPRR3Q9UBC9 169 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 TMCO1Q9UM00 188 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 HIVEP1P15822 2718 aa14.61□□□□□ -0.07
TUBB3-213ENST00000557262 LRRC3CA6NJW4 275 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 OR7A17O14581 309 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 TP53I11O14683 189 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 SSTR4P31391 388 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 ADH7P40394 386 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 ARL1P40616 181 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-213ENST00000557262 CCNG1P51959 295 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 TBCELQ5QJ74 424 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 HLA-DQA1Q5Y7H0 255 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 TTC19Q6DKK2 380 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-213ENST00000557262 OR52E8Q6IFG1 317 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 C8orf74Q6P047 294 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 SPNS3Q6ZMD2 512 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 LIX1LQ8IVB5 337 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 C17orf53Q8N3J3 647 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-213ENST00000557262 LIX1Q8N485 282 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 PTGR2Q8N8N7 351 aaPredicted RBP14.6□□□□□ -0.07
TUBB3-213ENST00000557262 ZNF441Q8N8Z8 693 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 OR4K14Q8NGD5 310 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 OR52B6Q8NGF0 335 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 NEIL3Q8TAT5 605 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 DIO2Q92813 273 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 PHF21BQ96EK2 531 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 CDK15Q96Q40 435 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 DOHHQ9BU89 302 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 ZNF358Q9NW07 568 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 NINJ2Q9NZG7 142 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 B4GALT7Q9UBV7 327 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 NPFFR2Q9Y5X5 522 aa14.6□□□□□ -0.07
TUBB3-213ENST00000557262 ANKRD17O75179 2603 aaKnown RBP14.6□□□□□ -0.07
TUBB3-213ENST00000557262 STX16-NPEPL1H3BU86 382 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 STX16O14662 325 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 TRIM3O75382 744 aaPredicted RBP14.59□□□□□ -0.07
TUBB3-213ENST00000557262 KLK1P06870 262 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 XKP51811 444 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 RIPPLY3P57055 190 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 CKAP4Q07065 602 aaKnown RBP14.59□□□□□ -0.07
TUBB3-213ENST00000557262 FUT7Q11130 342 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 MYBPHQ13203 477 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 SLC25A35Q3KQZ1 300 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 C10orf62Q5T681 223 aaPredicted RBP14.59□□□□□ -0.07
TUBB3-213ENST00000557262 RIPPLY2Q5TAB7 128 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 FRG2Q64ET8 278 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 TMEM64Q6YI46 380 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 RELL1Q8IUW5 271 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 GALNT12Q8IXK2 581 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 FRG2BQ96QU4 278 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 FUT8Q9BYC5 575 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 OR10A5Q9H207 317 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 SLC6A15Q9H2J7 730 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 TEX10Q9NXF1 929 aaPredicted RBP14.59□□□□□ -0.07
TUBB3-213ENST00000557262 ADAM29Q9UKF5 820 aa14.59□□□□□ -0.07
TUBB3-213ENST00000557262 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.59□□□□□ -0.07
TUBB3-213ENST00000557262 NINQ8N4C6 2090 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 A0A1W2PS29 197 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 AHRRA9YTQ3 701 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 SMIM24O75264 130 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 SNX4O95219 450 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 LRATO95237 230 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 INHBAP08476 426 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 CT62P0C5K7 136 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 COL6A2P12110 1019 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 GDF1P27539 372 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 MAGEA12P43365 314 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 TRPC1P48995 793 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 DLX5P56178 289 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 NRG3P56975 720 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 CCNYL2Q5T2Q4 361 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 PAGE2Q7Z2X7 111 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 MILR1Q7Z6M3 343 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 TMEM200AQ86VY9 491 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 ULK2Q8IYT8 1036 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 ZNF615Q8N8J6 731 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 SPPL2AQ8TCT8 520 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 TRPC4APQ8TEL6 797 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 SLC44A1Q8WWI5 657 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 ISL2Q96A47 359 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 ADIPOR1Q96A54 375 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 ZNF597Q96LX8 424 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 SECISBP2Q96T21 854 aaKnown RBP14.58□□□□□ -0.08
TUBB3-213ENST00000557262 ANGPTL4Q9BY76 406 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 TSPYL1Q9H0U9 437 aa14.58□□□□□ -0.08
TUBB3-213ENST00000557262 ZBTB26Q9HCK0 441 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms