RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MRFAP1Q9Y605 127 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 EPN1Q9Y6I3 576 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-223ENST00000557076 TENM1Q9UKZ4 2725 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 WNK1Q9H4A3 2382 aa4.31□□□□□ -1.72
SCFD1-223ENST00000557076 MED12Q93074 2177 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SAGE2PA6NJ88 616 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SGK494L7N484 410 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SLC16A5O15375 505 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 KIF5CO60282 957 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 ZFAND5O76080 213 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 APOA4P06727 396 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 FHP07954 510 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 PRSS56P0CW18 603 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 RBP3P10745 1247 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 CRYGSP22914 178 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 HRH2P25021 359 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 GPR143P51810 404 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 GEMP55040 296 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 NR1H2P55055 460 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TAS2R40P59535 323 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 EEF1A1P68104 462 aaKnown RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 ABATP80404 500 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 MXRA7P84157 204 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 NHLH2Q02577 135 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 UBXN1Q04323 297 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 ARHGAP19Q14CB8 494 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TERF2Q15554 542 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 ACSF3Q4G176 576 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SYTL3Q4VX76 610 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 XKR6Q5GH73 641 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 EEF1A1P5Q5VTE0 462 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 NPNTQ6UXI9 565 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 IL20RBQ6UXL0 311 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 LHFPL2Q6ZUX7 228 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SH2D5Q6ZV89 423 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 PRSS41Q7RTY9 318 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 GLB1L2Q8IW92 636 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 PM20D2Q8IYS1 436 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 PPHLN1Q8NEY8 458 aaKnown RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TMEM171Q8WVE6 324 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TSLPQ969D9 159 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TBC1D20Q96BZ9 403 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TM4SF19Q96DZ7 209 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 HSPBAP1Q96EW2 488 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 DNAJC1Q96KC8 554 aaKnown RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 CAPZA3Q96KX2 299 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 MARK4Q96L34 752 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 WFIKKN1Q96NZ8 548 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TTC1Q99614 292 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 TIMP4Q99727 224 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 EBNA1BP2Q99848 306 aaKnown RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 ACAT2Q9BWD1 397 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 PRDM13Q9H4Q3 707 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 ESRP2Q9H6T0 727 aaKnown RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 EXO5Q9H790 373 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 UBTD1Q9HAC8 227 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 CLK4Q9HAZ1 481 aaKnown RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 ANKHQ9HCJ1 492 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 NLE1Q9NVX2 485 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SPATA7Q9P0W8 599 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 HCN3Q9P1Z3 774 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 KLHL8Q9P2G9 620 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-223ENST00000557076 KLHL42Q9P2K6 505 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SPRR3Q9UBC9 169 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 CIDEBQ9UHD4 219 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 LCMT1Q9UIC8 334 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 FBXW2Q9UKT8 454 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 SLC22A7Q9Y694 548 aa4.3□□□□□ -1.72
SCFD1-223ENST00000557076 IGKV3D-11A0A0A0MRZ8 115 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 TRBV11-1A0A0K0K1C0 115 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 A0A1W2PR48 441 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 MBD3L3A6NE82 208 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 LGALS16A8MUM7 142 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 A8MXE2 369 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 EEF1E1-BLOC1S5C9J1V9 151 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CCL22O00626 93 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 KPNA5O15131 536 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 P2RX6O15547 441 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 EEF1E1O43324 174 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 OR1I1O60431 355 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CDC123O75794 336 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 OR2J2O76002 312 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 PROSCO94903 275 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 RCBTB2O95199 551 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CCNDBP1O95273 360 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 MATN4O95460 622 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ERGP11308 486 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 JAK1P23458 1154 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CXCR5P32302 372 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 RPA3P35244 121 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 AGFG1P52594 562 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CSE1LP55060 971 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 BTG2P78543 158 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 KLHL30Q0D2K2 578 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 TBL3Q12788 808 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 HERC3Q15034 1050 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF750Q32MQ0 723 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CCSMST1Q4G0I0 132 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms