RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CSAG2Q9Y5P2 127 aa16.27■□□□□ 0.2
SHMT2-225ENST00000556798 KALRNO60229 2985 aa16.27■□□□□ 0.19
SHMT2-225ENST00000556798 SPTA1P02549 2419 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 EXPH5Q8NEV8 1989 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 TCP11X1B4DZS4 312 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 CLPSP04118 112 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 IGKV3-11P04433 115 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 ATP1B1P05026 303 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 PRPS2P11908 318 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 SSTR4P31391 388 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 GALNSP34059 522 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 HPCAL1P37235 193 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 MRPS35P82673 323 aaKnown RBP16.26■□□□□ 0.19
SHMT2-225ENST00000556798 GUCY1A3Q02108 690 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 PRICKLE4Q2TBC4 344 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 ACER2Q5QJU3 275 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 C6orf163Q5TEZ5 329 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 ABHD17BQ5VST6 288 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 NXNQ6DKJ4 435 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 C16orf47Q6ZP98 133 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-225ENST00000556798 RGS9BPQ6ZS82 235 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 BEST3Q8N1M1 668 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 RBMXL3Q8N7X1 1067 aaKnown RBP16.26■□□□□ 0.19
SHMT2-225ENST00000556798 SUN3Q8TAQ9 357 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 CIDECQ96AQ7 238 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-225ENST00000556798 PPCDCQ96CD2 204 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 ART5Q96L15 291 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 BBS4Q96RK4 519 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 MFRPQ9BY79 579 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 EPS8L2Q9H6S3 715 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 SLAMF7Q9NQ25 335 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 ASIC5Q9NY37 505 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 MAT2BQ9NZL9 334 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 SH3BP4Q9P0V3 963 aa16.26■□□□□ 0.19
SHMT2-225ENST00000556798 NUP214P35658 2090 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-225ENST00000556798 SMG1Q96Q15 3661 aaKnown RBP16.26■□□□□ 0.19
SHMT2-225ENST00000556798 SCAMP2O15127 329 aaKnown RBP16.25■□□□□ 0.19
SHMT2-225ENST00000556798 DIAPH2O60879 1101 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 ZFAND5O76080 213 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 ALDOCP09972 364 aaKnown RBP16.25■□□□□ 0.19
SHMT2-225ENST00000556798 NTSP30990 170 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 NCBP2P52298 156 aaKnown RBP eCLIP16.25■□□□□ 0.19
SHMT2-225ENST00000556798 MGAT2Q10469 447 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 PDE7AQ13946 482 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 EXOSC7Q15024 291 aaKnown RBP16.25■□□□□ 0.19
SHMT2-225ENST00000556798 CEBPEQ15744 281 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 MEP1AQ16819 746 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 SMU1Q2TAY7 513 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 NADK2Q4G0N4 442 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 IGFL2Q6UWQ7 119 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 HSDL2Q6YN16 418 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 RNF111Q6ZNA4 994 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 RPS19BP1Q86WX3 136 aaKnown RBP16.25■□□□□ 0.19
SHMT2-225ENST00000556798 C9orf40Q8IXQ3 194 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 VWA5B2Q8N398 1253 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 SIMC1Q8NDZ2 872 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 OR7A2PQ8NGA2 310 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 KAT2AQ92830 837 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 THOC1Q96FV9 657 aaKnown RBP16.25■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF354BQ96LW1 612 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 OR52B2Q96RD2 323 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 LMF1Q96S06 567 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 ANKRD10Q9NXR5 420 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 TAS2R7Q9NYW3 318 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 STMN3Q9NZ72 180 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 TEKT2Q9UIF3 430 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 EML6Q6ZMW3 1958 aa16.25■□□□□ 0.19
SHMT2-225ENST00000556798 TMEM200CA6NKL6 621 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 GABRR3A8MPY1 467 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 MYO1GB0I1T2 1018 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 PDPK1O15530 556 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 DPM1O60762 260 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 C1QL1O75973 258 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 WDPCPO95876 746 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 PCSK2P16519 638 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 EFNA1P20827 205 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-225ENST00000556798 SOX18P35713 384 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 MLF1P58340 268 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 RNF4P78317 190 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 ARG2P78540 354 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 MPEG1Q2M385 716 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF628Q5EBL2 1059 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 OGFOD2Q6N063 350 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 IGFL3Q6UXB1 125 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 SAMD14Q8IZD0 417 aaPredicted RBP16.24■□□□□ 0.19
SHMT2-225ENST00000556798 FAM9CQ8IZT9 166 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 ZADH2Q8N4Q0 377 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 TM9SF4Q92544 642 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 MAELQ96JY0 434 aaKnown RBP16.24■□□□□ 0.19
SHMT2-225ENST00000556798 MARK4Q96L34 752 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 GLIPR2Q9H4G4 154 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 ANKRA2Q9H9E1 313 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 LUZP4Q9P127 313 aa16.24■□□□□ 0.19
SHMT2-225ENST00000556798 EIF4E1BA6NMX2 242 aaKnown RBP16.23■□□□□ 0.19
SHMT2-225ENST00000556798 WWP2O00308 870 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 TBX19O60806 448 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 EDF1O60869 148 aaKnown RBP16.23■□□□□ 0.19
SHMT2-225ENST00000556798 MPIP34949 423 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 NME5P56597 212 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 SLC37A1P57057 533 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms