RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 CHDHQ8NE62 594 aaPredicted RBP3.07□□□□□ -1.92
GPHN-214ENST00000556633 OR1K1Q8NGR3 316 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 OR1B1Q8NGR6 318 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 RDH11Q8TC12 318 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 HIST1H2ACQ93077 130 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 CDHR1Q96JP9 859 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 ZNF597Q96LX8 424 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 NSMCE2Q96MF7 247 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 ZNF396Q96N95 335 aaPredicted RBP3.07□□□□□ -1.92
GPHN-214ENST00000556633 COQ7Q99807 217 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 ATF6BQ99941 703 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 RBM4BQ9BQ04 359 aaKnown RBP3.07□□□□□ -1.92
GPHN-214ENST00000556633 CHCHD5Q9BSY4 110 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 OCR1Q9BZK8 76 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 SP140LQ9H930 580 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 HOMER3Q9NSC5 361 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 SPASTQ9UBP0 616 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 EIF3KQ9UBQ5 218 aaKnown RBP3.07□□□□□ -1.92
GPHN-214ENST00000556633 CTSZQ9UBR2 303 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 PRSS21Q9Y6M0 314 aa3.07□□□□□ -1.92
GPHN-214ENST00000556633 TMEM89A2RUT3 159 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 TRIM64CA6NLI5 447 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 SH2D1BO14796 132 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 TSPAN2O60636 221 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 MT-ATP6P00846 226 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 CXCL10P02778 98 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 FCER2P06734 321 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 PROS1P07225 676 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 APRTP07741 180 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 KRT5P13647 590 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 ACP1P24666 158 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 ETV5P41161 510 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 VEGFCP49767 419 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 RIDAP52758 137 aaKnown RBP3.06□□□□□ -1.92
GPHN-214ENST00000556633 RPS4XP62701 263 aaKnown RBP3.06□□□□□ -1.92
GPHN-214ENST00000556633 MS4A2Q01362 244 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 IL1RL1Q01638 556 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 PAX8Q06710 450 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 CD300CQ08708 224 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 GAMTQ14353 236 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 SIX1Q15475 284 aaPredicted RBP3.06□□□□□ -1.92
GPHN-214ENST00000556633 POM121L1PQ3SYA9 428 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 STEAP1BQ6NZ63 245 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 ASRGL1Q7L266 308 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 NUFIP2Q7Z417 695 aaKnown RBP3.06□□□□□ -1.92
GPHN-214ENST00000556633 Q8N377 158 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 HDDC3Q8N4P3 179 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 ZNF781Q8N8C0 355 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 ZNRF1Q8ND25 227 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 PNPLA2Q96AD5 504 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 TMEM186Q96B77 213 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 C16orf58Q96GQ5 468 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 TSPY26PQ9H489 355 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 TUBB1Q9H4B7 451 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 NT5DC2Q9H857 520 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 JPT2Q9H910 190 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 PANK3Q9H999 370 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 HPS4Q9NQG7 708 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.06□□□□□ -1.92
GPHN-214ENST00000556633 GTSE1Q9NYZ3 720 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 NINJ2Q9NZG7 142 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 NPC1L1Q9UHC9 1359 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 ZNF346Q9UL40 294 aaKnown RBP3.06□□□□□ -1.92
GPHN-214ENST00000556633 MGAT4AQ9UM21 535 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 UNC13AQ9UPW8 1703 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 ENTPD4Q9Y227 616 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 NUDCQ9Y266 331 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 SLC6A5Q9Y345 797 aa3.06□□□□□ -1.92
GPHN-214ENST00000556633 SALL1Q9NSC2 1324 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 KRTAP16-1A8MUX0 517 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 FAM25EA8MYX2 175 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 FRAT2O75474 233 aaPredicted RBP3.05□□□□□ -1.92
GPHN-214ENST00000556633 HPRP00739 348 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 CGAP01215 116 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 IGHG1P01857 330 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 SERPINB2P05120 415 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 OR9G9P0C7N8 305 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 ETS1P14921 441 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 GNSP15586 552 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 IL10P22301 178 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 MAPK3P27361 379 aaPredicted RBP3.05□□□□□ -1.92
GPHN-214ENST00000556633 AKT2P31751 481 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 RABIFP47224 123 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 ZNF131P52739 623 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 NDST1P52848 882 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 ATXN3P54252 364 aaPredicted RBP3.05□□□□□ -1.92
GPHN-214ENST00000556633 KRTAP10-9P60411 292 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 SARNPP82979 210 aaKnown RBP3.05□□□□□ -1.92
GPHN-214ENST00000556633 FCHO2Q0JRZ9 810 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 ITPK1Q13572 414 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 RAPSNQ13702 412 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 ENPP2Q13822 863 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 BTG3Q14201 252 aaPredicted RBP3.05□□□□□ -1.92
GPHN-214ENST00000556633 EMC2Q15006 297 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 CLPPQ16740 277 aaPredicted RBP3.05□□□□□ -1.92
GPHN-214ENST00000556633 UNC50Q53HI1 259 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 GPRIN3Q6ZVF9 776 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 ADGRD2Q7Z7M1 963 aa3.05□□□□□ -1.92
GPHN-214ENST00000556633 YRDCQ86U90 279 aaKnown RBP3.05□□□□□ -1.92
GPHN-214ENST00000556633 LCA5Q86VQ0 697 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms