RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DEFB123Q8N688 67 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 CSNK1A1LQ8N752 337 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 CADM4Q8NFZ8 388 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 SLX1AQ9BQ83 275 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 CHRDQ9H2X0 955 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 TNFRSF11BO00300 401 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 NR2F1P10589 423 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 FAM92BQ6ZTR7 304 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 TBC1D20Q96BZ9 403 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 C10orf90Q96M02 699 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 RDH12Q96NR8 316 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 COL21A1Q96P44 957 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 ZNF300Q96RE9 604 aaPredicted RBP17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 PSME2Q9UL46 239 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 DAPP1Q9UN19 280 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 NAALAD2Q9Y3Q0 740 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 PCDHGA8Q9Y5G5 932 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 KCNE3Q9Y6H6 103 aa17.25■□□□□ 0.35
SDR39U1-220ENST00000556548 SLC9B1P1A6NJY1 282 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 ATXN8OSP0DMR3 200 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 IL7RP16871 459 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 XKP51811 444 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 RAD23AP54725 363 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 RNF44Q7L0R7 432 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 GKN2Q86XP6 184 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 C8orf59Q8N0T1 100 aaPredicted RBP17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 AVL9Q8NBF6 648 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 SIMC1Q8NDZ2 872 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 FAM174AQ8TBP5 190 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 GEMIN6Q8WXD5 167 aaKnown RBP17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 PPP1R14BQ96C90 147 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 TREX2Q9BQ50 279 aaPredicted RBP17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 GABARAPL1Q9H0R8 117 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 UCKL1Q9NWZ5 548 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 RHBDL2Q9NX52 303 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 POMT2Q9UKY4 750 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 PCDHGB3Q9Y5G1 929 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 LYVE1Q9Y5Y7 322 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 SCN2AQ99250 2005 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 RECKO95980 971 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 PUM1Q14671 1186 aaKnown RBP eCLIP17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 MEP1AQ16819 746 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 C6orf132Q5T0Z8 1188 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 KDM4DQ6B0I6 523 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 ARMC8Q8IUR7 673 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 NUP43Q8NFH3 380 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 GPR32P1Q8NGA4 272 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 TMIGD2Q96BF3 282 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 ELP4Q96EB1 424 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 ADNPQ9H2P0 1102 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 SEMA6CQ9H3T2 930 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 P2RX2Q9UBL9 471 aa17.24■□□□□ 0.35
SDR39U1-220ENST00000556548 TMEM247A6NEH6 219 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 FAM227AF5H4B4 570 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 LDB3O75112 727 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 MFN2O95140 757 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 PABPC4LP0CB38 370 aaKnown RBP17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 EPHA2P29317 976 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 TSSK4Q6SA08 328 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 RBM44Q6ZP01 1051 aaKnown RBP17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 THAP5Q7Z6K1 395 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 SLC30A8Q8IWU4 369 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 PIK3C3Q8NEB9 887 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 VANGL1Q8TAA9 524 aaPredicted RBP17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 THAP11Q96EK4 314 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 SLC38A3Q99624 504 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 EPYCQ99645 322 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 MAP3K3Q99759 626 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 WFDC6Q9BQY6 131 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 ROGDIQ9GZN7 287 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 KRT84Q9NSB2 600 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 AASSQ9UDR5 926 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 PHF11Q9UIL8 331 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 KLK4Q9Y5K2 254 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 VPS13AQ96RL7 3174 aa17.23■□□□□ 0.35
SDR39U1-220ENST00000556548 CCDC160A6NGH7 325 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 SGK494L7N484 410 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 AQP9O43315 295 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 FHP07954 510 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 CXCL12P48061 93 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 EPS8Q12929 822 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 ELOAQ14241 798 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 KCTD21Q4G0X4 260 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 TMEM52Q8NDY8 209 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 OR4K14Q8NGD5 310 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 SPACA7Q96KW9 195 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 ZSCAN32Q9NX65 697 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 SEC14L3Q9UDX4 400 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 SIT1Q9Y3P8 196 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 SPAG17Q6Q759 2223 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 BCKDKO14874 412 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 EMC8O43402 210 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 ETS2P15036 469 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 CD247P20963 164 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 TLX1P31314 330 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 KHKP50053 298 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 NR1H2P55055 460 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 SHC2P98077 582 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 EXOC3L2Q2M3D2 409 aa17.22■□□□□ 0.35
SDR39U1-220ENST00000556548 CTU2Q2VPK5 515 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms