RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 METTL7AQ9H8H3 244 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 WWOXQ9NZC7 414 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 OARD1Q9Y530 152 aa12.69□□□□□ -0.38
ACTN1-219ENST00000556432 USF3Q68DE3 2245 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 C2orf92A0A1B0GVN3 265 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 OR6C76A6NM76 312 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 SAP18O00422 153 aaKnown RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 ZNF37AP17032 561 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 KRT15P19012 456 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 HIST1H1TP22492 207 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 CRYGSP22914 178 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 TLX1P31314 330 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 MC3RP41968 323 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 ATP5J2P56134 94 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 NRG3P56975 720 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 IGLV3-21P80748 117 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 GAB1Q13480 694 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 TSNQ15631 228 aaKnown RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 HIST2H2ACQ16777 129 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 C10orf62Q5T681 223 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 FNDC7Q5VTL7 733 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 HIST2H2AA3Q6FI13 130 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 SCIMPQ6UWF3 145 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 ANGPTL8Q6UXH0 198 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 UBE3DQ7Z6J8 389 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 NKAPQ8N5F7 415 aaKnown RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 MEIOBQ8N635 442 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 CNEP1R1Q8N9A8 125 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 BBOF1Q8ND07 529 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 OR1J4Q8NGS1 313 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 OR14L1PQ8NHC6 308 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 TMEM171Q8WVE6 324 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 RIT1Q92963 219 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 VPS39Q96JC1 886 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 ANGPTL4Q9BY76 406 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 CXorf56Q9H5V9 222 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 DNAJC11Q9NVH1 559 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 GPRC5BQ9NZH0 403 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 CTNNAL1Q9UBT7 734 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-219ENST00000556432 WIF1Q9Y5W5 379 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 IKBKGQ9Y6K9 419 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 ROS1P08922 2347 aa12.68□□□□□ -0.38
ACTN1-219ENST00000556432 BANF1O75531 89 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 TTC4O95801 387 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 PCNAP12004 261 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 CPN1P15169 458 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 CASP3P42574 277 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 SLC6A12P48065 614 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 KCNJ5P48544 419 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 ZNF75DP51815 510 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 SLC37A1P57057 533 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 EEF1A1P68104 462 aaKnown RBP12.67□□□□□ -0.38
ACTN1-219ENST00000556432 KRTAP1-1Q07627 177 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 SLAMF1Q13291 335 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 BIKQ13323 160 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 TNK1Q13470 666 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 VEZF1Q14119 521 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 DOC2AQ14183 400 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 FBXO48Q5FWF7 155 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 PAGE2BQ5JRK9 111 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 SPANXN3Q5MJ09 141 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 EEF1A1P5Q5VTE0 462 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 TIGD3Q6B0B8 471 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 ZNF550Q7Z398 422 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 P4HA3Q7Z4N8 544 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 ADAMTSL2Q86TH1 951 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 CNTN4Q8IWV2 1026 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 PRR22Q8IZ63 422 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 ST13P4Q8IZP2 240 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-219ENST00000556432 RDH11Q8TC12 318 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 TANKQ92844 425 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 RHBDF1Q96CC6 855 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 PTCD3Q96EY7 689 aaKnown RBP12.67□□□□□ -0.38
ACTN1-219ENST00000556432 CERS2Q96G23 380 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
ACTN1-219ENST00000556432 EFCAB11Q9BUY7 163 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 SORBS1Q9BX66 1292 aaKnown RBP12.67□□□□□ -0.38
ACTN1-219ENST00000556432 EHD1Q9H4M9 534 aa12.67□□□□□ -0.38
ACTN1-219ENST00000556432 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
ACTN1-219ENST00000556432 ZNF490Q9ULM2 529 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-219ENST00000556432 A0A1W2PNV4 684 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 HAX1O00165 279 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 MSTNO14793 375 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 PRKRAO75569 313 aaKnown RBP12.66□□□□□ -0.38
ACTN1-219ENST00000556432 TGFB1P01137 390 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 PTPN6P29350 595 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 CXCR5P32302 372 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 CD79BP40259 229 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 RAP1GDS1P52306 607 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 RPS13P62277 151 aaKnown RBP12.66□□□□□ -0.38
ACTN1-219ENST00000556432 TNFRSF17Q02223 184 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms