RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DKK1O94907 266 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 NUDT7P0C024 238 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CT62P0C5K7 136 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 NT5EP21589 574 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 MVDP53602 400 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 OR4D2P58180 307 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 ELF3P78545 371 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 TARDBPQ13148 414 aaKnown RBP eCLIP9.56□□□□□ -0.88
SRP54-208ENST00000555557 KPNB1Q14974 876 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 TRMT12Q53H54 448 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 C3orf38Q5JPI3 329 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 DCAF12Q5T6F0 453 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 C1orf146Q5VVC0 180 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 MLIPQ5VWP3 458 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CYB5D1Q6P9G0 228 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 OR7G2Q8NG99 324 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 PSMA8Q8TAA3 256 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 STT3BQ8TCJ2 826 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 ADAMTS18Q8TE60 1221 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 TSLPQ969D9 159 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 ELP4Q96EB1 424 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 LIN37Q96GY3 246 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 OR1F2PQ96R84 312 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 SH3GL1Q99961 368 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 KCTD14Q9BQ13 255 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 FER1L5A0AVI2 2057 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CNOT1A5YKK6 2376 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 TMX2-CTNND1H3BSU7 103 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 UPK1AO00322 258 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 PLD2O14939 933 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 OR10H2O60403 315 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CIB2O75838 187 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 HBQ1P09105 142 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 ETFAP13804 333 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 NCK1P16333 377 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 GPX2P18283 190 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CSRP1P21291 193 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 CRATP43155 626 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 GZMMP51124 257 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 NOVA1P51513 510 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 HSD17B7P56937 341 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 EEFSECP57772 596 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 TP53BP2Q13625 1128 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 TRIM25Q14258 630 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 RGNQ15493 299 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 FAM69BQ5VUD6 431 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CEACAM20Q6UY09 585 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 GPR155Q7Z3F1 870 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 C6orf120Q7Z4R8 191 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 SAMD14Q8IZD0 417 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 GALNT6Q8NCL4 622 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 NETO1Q8TDF5 533 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 OTUB1Q96FW1 271 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 YIPF4Q9BSR8 244 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 SOX17Q9H6I2 414 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 EPS8L2Q9H6S3 715 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 MKKSQ9NPJ1 570 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 ZCCHC3Q9NUD5 404 aaKnown RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 IFT80Q9P2H3 777 aaPredicted RBP9.56□□□□□ -0.88
SRP54-208ENST00000555557 MKL2Q9ULH7 1088 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 SATB2Q9UPW6 733 aa9.56□□□□□ -0.88
SRP54-208ENST00000555557 CCDC187A0A096LP49 1063 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 C9orf172C9J069 976 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 ACOT8O14734 319 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 CNOT3O75175 753 aaKnown RBP9.55□□□□□ -0.88
SRP54-208ENST00000555557 ENTPD5O75356 428 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 IFNA16P05015 189 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 ATP1B1P05026 303 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 ZGLP1P0C6A0 271 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 SLC35E2P0CK97 266 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 HSD17B1P14061 328 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 RHAGQ02094 409 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 OCA2Q04671 838 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 PRICKLE4Q2TBC4 344 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 ZNF628Q5EBL2 1059 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 SAXO2Q658L1 398 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 FAAH2Q6GMR7 532 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 TNFAIP8L2Q6P589 184 aaPredicted RBP9.55□□□□□ -0.88
SRP54-208ENST00000555557 CYP2R1Q6VVX0 501 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 WDR53Q7Z5U6 358 aaPredicted RBP9.55□□□□□ -0.88
SRP54-208ENST00000555557 CALHM3Q86XJ0 350 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 AMER2Q8N7J2 671 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 OR2T12Q8NG77 320 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 MAL2Q969L2 176 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 C16orf58Q96GQ5 468 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 RBM18Q96H35 190 aaKnown RBP9.55□□□□□ -0.88
SRP54-208ENST00000555557 TAAR9Q96RI9 348 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 MESP1Q9BRJ9 268 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 VN1R1Q9GZP7 353 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 EQTNQ9NQ60 294 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 SEMA3GQ9NS98 782 aa9.55□□□□□ -0.88
SRP54-208ENST00000555557 BLACEA4D250 179 aa9.54□□□□□ -0.88
SRP54-208ENST00000555557 A8MUA0 341 aa9.54□□□□□ -0.88
SRP54-208ENST00000555557 HRKO00198 91 aa9.54□□□□□ -0.88
SRP54-208ENST00000555557 STK17BO94768 372 aa9.54□□□□□ -0.88
SRP54-208ENST00000555557 KCNK5O95279 499 aa9.54□□□□□ -0.88
SRP54-208ENST00000555557 RECKO95980 971 aa9.54□□□□□ -0.88
SRP54-208ENST00000555557 HMGN2P05204 90 aaKnown RBP9.54□□□□□ -0.88
SRP54-208ENST00000555557 KLK3P07288 261 aaPredicted RBP9.54□□□□□ -0.88
SRP54-208ENST00000555557 CDK4P11802 303 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms