RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 NEMFO60524 1076 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 CLN5O75503 358 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 TXNDC12O95881 172 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 TFAP2AP05549 437 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 CAPN1P07384 714 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 CCDC130P13994 396 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 CYP11B1P15538 503 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 ZNF23P17027 643 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 AXLP30530 894 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 TRIM23P36406 574 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 ETV1P50549 477 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 PRMT2P55345 433 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 GABPAQ06546 454 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 TRAP1Q12931 704 aaKnown RBP4.64□□□□□ -1.67
VRK1-203ENST00000555067 ZNF311Q5JNZ3 666 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 ARMC12Q5T9G4 340 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 ATF7IP2Q5U623 682 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 SEL1L3Q68CR1 1132 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 OR7E24Q6IFN5 339 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 FAM171BQ6P995 826 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 SYT10Q6XYQ8 523 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 NBPF5PQ86XG9 351 aaPredicted RBP4.64□□□□□ -1.67
VRK1-203ENST00000555067 CBWD2Q8IUF1 395 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 IQCF2Q8IXL9 164 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 CDK20Q8IZL9 346 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 PRSS35Q8N3Z0 413 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 KLHDC1Q8N7A1 406 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 TMEM99Q8N816 258 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 FAM184AQ8NB25 1140 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 RAPGEF5Q92565 580 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 SGK494Q96LW2 274 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 CASD1Q96PB1 797 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 DEFB118Q96PH6 123 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 VPS35Q96QK1 796 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 UBAC1Q9BSL1 405 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 NUSAP1Q9BXS6 441 aaKnown RBP4.64□□□□□ -1.67
VRK1-203ENST00000555067 LRRCC1Q9C099 1032 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 MIS12Q9H081 205 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 RAVER2Q9HCJ3 691 aaKnown RBP4.64□□□□□ -1.67
VRK1-203ENST00000555067 APMAPQ9HDC9 416 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 A4GALTQ9NPC4 353 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 RNF14Q9UBS8 474 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 BCAP29Q9UHQ4 241 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 TEKT2Q9UIF3 430 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 PILRAQ9UKJ1 303 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 PLCL2Q9UPR0 1127 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 IL16Q14005 1332 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 PHLPP2Q6ZVD8 1323 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 A0A075B6Q4 140 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 ATP6AP2A0A1C7CYW4 349 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 RNF222A6NCQ9 220 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 PAHP00439 452 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 CSF2P04141 144 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 APRTP07741 180 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 HIST1H2AGP0C0S8 130 aaPredicted RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 ANPEPP15144 967 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 UQCRC2P22695 453 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 SUCLG1P53597 346 aaKnown RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 RPL24P83731 157 aaKnown RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 BST1Q10588 318 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 NME3Q13232 169 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 NFATC2Q13469 925 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 HEPACAMQ14CZ8 416 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 EXOSC7Q15024 291 aaKnown RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 TTC23Q5W5X9 447 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 SNRNP48Q6IEG0 339 aaKnown RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 ZNF497Q6ZNH5 498 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 COX8CQ7Z4L0 72 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 ZC3H3Q8IXZ2 948 aaKnown RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 ZNF444Q8N0Y2 327 aaPredicted RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 STPG4Q8N801 248 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 LRTM2Q8N967 370 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 RNF149Q8NC42 400 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 OLIG1Q8TAK6 271 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 SUSD6Q92537 303 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 P3H4Q92791 437 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 EMG1Q92979 244 aaKnown RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 HIST1H2ACQ93077 130 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 SENP5Q96HI0 755 aaPredicted RBP4.63□□□□□ -1.67
VRK1-203ENST00000555067 NPAS2Q99743 824 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 DPEP2Q9H4A9 486 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 EHD1Q9H4M9 534 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 MEAF6Q9HAF1 191 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 PELI2Q9HAT8 420 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 KCNK13Q9HB14 408 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 SLC52A3Q9NQ40 469 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 AGPAT5Q9NUQ2 364 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 SPHK1Q9NYA1 384 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 LHX3Q9UBR4 397 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 SLC12A6Q9UHW9 1150 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 KIAA1257Q9ULG3 409 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 OR10H1Q9Y4A9 318 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 ETV7Q9Y603 341 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 TNIKQ9UKE5 1360 aa4.63□□□□□ -1.67
VRK1-203ENST00000555067 ZCWPW2A0A1B0GU75 182 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 ARHGEF35A5YM69 484 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 MEI4A8MW99 385 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 ZNF732B4DXR9 585 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 NPIPA2E9PIF3 369 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms