RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 POLR2LP62875 67 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SSBP1Q04837 148 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 BCL2L1Q07817 233 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 DUSP4Q13115 394 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CAMK2BQ13554 666 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 LARS2Q15031 903 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SYT14P1Q58G82 188 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 GCNT6Q5T4J0 391 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ATXN7L2Q5T6C5 722 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 PRPF38BQ5VTL8 546 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 KHDRBS2Q5VWX1 349 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 AGTRAPQ6RW13 159 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 BAIAP2L2Q6UXY1 529 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF852Q6ZMS4 543 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 USP53Q70EK8 1073 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 UBE2R2Q712K3 238 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 PARS2Q7L3T8 475 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 COMMD6Q7Z4G1 85 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TPRA1Q86W33 373 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 DENND1CQ8IV53 801 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SLC44A2Q8IWA5 706 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 HS3ST5Q8IZT8 346 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NAGSQ8N159 534 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CCNYL1Q8N7R7 359 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CDYL2Q8N8U2 506 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF441Q8N8Z8 693 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 LINC01555Q8NAE3 123 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 C11orf65Q8NCR3 313 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 C7orf57Q8NEG2 295 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 OR4M1Q8NGD0 313 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CNIH3Q8TBE1 160 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 DNAJB14Q8TBM8 379 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 FAM174AQ8TBP5 190 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NUDT8Q8WV74 236 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ASZ1Q8WWH4 475 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 IRF7Q92985 503 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CCDC124Q96CT7 223 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 AMDHD1Q96NU7 426 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 GFI1Q99684 422 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 WFDC6Q9BQY6 131 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CORO1BQ9BR76 489 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MND1Q9BWT6 205 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 RAB11FIP5Q9BXF6 653 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 BTBD1Q9H0C5 482 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 LIN28AQ9H9Z2 209 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 EIF3KQ9UBQ5 218 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 B4GALT6Q9UBX8 382 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 KLQ9UEF7 1012 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ADAM30Q9UKF2 790 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 BAG5Q9UL15 447 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ZMIZ1Q9ULJ6 1067 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 FZD4Q9ULV1 537 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SLC6A14Q9UN76 642 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 COLQQ9Y215 455 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 PTPRBP23467 1997 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MYOFQ9NZM1 2061 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 IGLV3-32A0A0A0MS00 114 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 FAM149AA5PLN7 773 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SYNDIG1LA6NDD5 238 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 FOXI3A8MTJ6 420 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 POLR1CO15160 346 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 STX7O15400 261 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TSPAN3O60637 253 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CSF3P09919 207 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 IL9P15248 144 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CDH3P22223 829 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NOS3P29474 1203 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 S100A3P33764 101 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 PTGS2P35354 604 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MSX2P35548 267 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 EVX1P49640 407 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 RPL38P63173 70 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 UBE2IP63279 158 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CDONQ4KMG0 1287 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NXNL2Q5VZ03 156 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 REEP3Q6NUK4 255 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 DOK6Q6PKX4 331 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 WDR88Q6ZMY6 472 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 FOXL2NBQ6ZUU3 175 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TRIM74Q86UV6 250 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TRIM73Q86UV7 250 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SYS1Q8N2H4 156 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 LNX2Q8N448 690 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SLC5A8Q8N695 610 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 OR7A2PQ8NGA2 310 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 OR8D4Q8NGM9 314 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 OR8J1Q8NGP2 316 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MAGEE2Q8TD90 523 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SLC38A5Q8WUX1 472 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NEIL2Q969S2 332 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ESAMQ96AP7 390 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CDK15Q96Q40 435 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 COPS8Q99627 209 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 RHNO1Q9BSD3 238 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM43Q9BTV4 400 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 EDEM2Q9BV94 578 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SLC38A1Q9H2H9 487 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 WDR26Q9H7D7 661 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 C8orf33Q9H7E9 229 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NMNAT1Q9HAN9 279 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms