RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 TRIM4Q9C037 500 aa17.18■□□□□ 0.34
PSEN1-210ENST00000554131 SEMA4CQ9C0C4 833 aa17.18■□□□□ 0.34
PSEN1-210ENST00000554131 ACSS1Q9NUB1 689 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-210ENST00000554131 MED13Q9UHV7 2174 aa17.18■□□□□ 0.34
PSEN1-210ENST00000554131 EFNA1P20827 205 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-210ENST00000554131 NCBP2P52298 156 aaKnown RBP eCLIP17.17■□□□□ 0.342e-8■■□□□ 11.9
PSEN1-210ENST00000554131 SRSF11Q05519 484 aaKnown RBP17.17■□□□□ 0.34
PSEN1-210ENST00000554131 FUT7Q11130 342 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 CHAF1BQ13112 559 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 DUSP8Q13202 625 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 ITPR1Q14643 2758 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 MLC1Q15049 377 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 EXT1Q16394 746 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 DPY19L1Q2PZI1 675 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 FAM174BQ3ZCQ3 159 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 FHL5Q5TD97 284 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 OR4F3Q6IEY1 312 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 FAM111BQ6SJ93 734 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 ZNF551Q7Z340 670 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-210ENST00000554131 GALNT12Q8IXK2 581 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 GLB1L3Q8NCI6 653 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-210ENST00000554131 B3GNT7Q8NFL0 401 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 ADCY4Q8NFM4 1077 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 M1APQ8TC57 530 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 PSMF1Q92530 271 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 DAZLQ92904 295 aaKnown RBP17.17■□□□□ 0.34
PSEN1-210ENST00000554131 SENP5Q96HI0 755 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-210ENST00000554131 FBXL20Q96IG2 436 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 VPS50Q96JG6 964 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 FER1L6-AS2Q96M78 137 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 BBS4Q96RK4 519 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 CCT8L2Q96SF2 557 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 ING2Q9H160 280 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 MMP25Q9NPA2 562 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 SAR1AQ9NR31 198 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 GIMAP4Q9NUV9 329 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 TRIM33Q9UPN9 1127 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 CLCA3PQ9Y6N3 262 aa17.17■□□□□ 0.34
PSEN1-210ENST00000554131 NCF2P19878 526 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-210ENST00000554131 NT5EP21589 574 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 NTSP30990 170 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 MPIP34949 423 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 KIR3DL1P43629 444 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 DGKQP52824 942 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 AIMP2Q13155 320 aaKnown RBP17.16■□□□□ 0.34
PSEN1-210ENST00000554131 RCAN2Q14206 197 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 RPS6KA2Q15349 733 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 ST3GAL2Q16842 350 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 PGS1Q32NB8 556 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 KIF2BQ8N4N8 673 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 OR1N1Q8NGS0 311 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 PSMA8Q8TAA3 256 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 NCLNQ969V3 563 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 PRPF18Q99633 342 aaKnown RBP17.16■□□□□ 0.34
PSEN1-210ENST00000554131 NUDT9Q9BW91 350 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 NMUR2Q9GZQ4 415 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 SIRT3Q9NTG7 399 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-210ENST00000554131 ATAD3AQ9NVI7 634 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 TMEM45AQ9NWC5 275 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 ERVK-19Q9WJR5 959 aa17.16■□□□□ 0.34
PSEN1-210ENST00000554131 TPRP12270 2363 aaKnown RBP17.16■□□□□ 0.34
PSEN1-210ENST00000554131 DOCK10Q96BY6 2186 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 FAM234BA2RU67 622 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 ASPDHA6ND91 283 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 PLOD2O00469 737 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 RNASET2O00584 256 aaKnown RBP17.15■□□□□ 0.34
PSEN1-210ENST00000554131 PRKNO60260 465 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-210ENST00000554131 CEACAM4O75871 244 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 DNAJB5O75953 348 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 CBX7O95931 251 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 FAM107AO95990 144 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 SERPINA7P05543 415 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 PGRP06401 933 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 IFI6P09912 130 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 ITGAMP11215 1152 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 TNNI3P19429 210 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 CDK9P50750 372 aaKnown RBP17.15■□□□□ 0.34
PSEN1-210ENST00000554131 PGDP52209 483 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 RRADP55042 308 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 SLC37A1P57057 533 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 STX1BP61266 288 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 MRPS35P82673 323 aaKnown RBP17.15■□□□□ 0.34
PSEN1-210ENST00000554131 ZNF267Q14586 743 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-210ENST00000554131 TBR1Q16650 682 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 BTBD16Q32M84 506 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 TRMT12Q53H54 448 aaKnown RBP17.15■□□□□ 0.34
PSEN1-210ENST00000554131 H3F3CQ6NXT2 135 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 BLOC1S3Q6QNY0 202 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 VWA5B2Q8N398 1253 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 NATD1Q8N6N6 113 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 ZNF615Q8N8J6 731 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 OR7G2Q8NG99 324 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 KAT2AQ92830 837 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 ZBED6CLQ96FA7 236 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-210ENST00000554131 OR8D2Q9GZM6 311 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 ANKRA2Q9H9E1 313 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 ATP13A2Q9NQ11 1180 aa17.15■□□□□ 0.34
PSEN1-210ENST00000554131 PKD1L2Q7Z442 2459 aa17.14■□□□□ 0.34
PSEN1-210ENST00000554131 A0A1W2PRB8 838 aa17.14■□□□□ 0.33
PSEN1-210ENST00000554131 TMEM200CA6NKL6 621 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms