RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 PIGWQ7Z7B1 504 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 ADAMTSL2Q86TH1 951 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 TTC30BQ8N4P2 665 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 TSPAN14Q8NG11 270 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 CFAP61Q8NHU2 1237 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 SEPT1Q8WYJ6 367 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 CDHR1Q96JP9 859 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 GOLPH3LQ9H4A5 285 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 PEAK1Q9H792 1746 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 RPF1Q9H9Y2 349 aaKnown RBP0.68□□□□□ -2.3
KTN1-211ENST00000553710 GDE1Q9NZC3 331 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 TBC1D7Q9P0N9 293 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 AGTPBP1Q9UPW5 1226 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 PTRH2Q9Y3E5 179 aaKnown RBP0.68□□□□□ -2.3
KTN1-211ENST00000553710 SHANK1Q9Y566 2161 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 WSB1Q9Y6I7 421 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 MYO16Q9Y6X6 1858 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 COL6A6A6NMZ7 2263 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 PRDM15P57071 1507 aaPredicted RBP0.68□□□□□ -2.3
KTN1-211ENST00000553710 PNPLA6Q8IY17 1366 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 FLG2Q5D862 2391 aaPredicted RBP0.68□□□□□ -2.3
KTN1-211ENST00000553710 SCN11AQ9UI33 1791 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 DNMT1P26358 1616 aaKnown RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 ATP10BO94823 1461 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 RICTORQ6R327 1708 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 TIAM1Q13009 1591 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 UGGT1Q9NYU2 1555 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 NUP160Q12769 1436 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 FMN1Q68DA7 1419 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 CD109Q6YHK3 1445 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 A0A1B0GVC2 190 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 TMEM150BA6NC51 233 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 SLC15A5A6NIM6 579 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 ZNF724A8MTY0 619 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 H3BMM5 538 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 RTN2O75298 545 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 FGF19O95750 216 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 PRB1P04280 392 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 STAG3L1P0CL83 205 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 HADHAP40939 763 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 NRIP1P48552 1158 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 STAT2P52630 851 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 BACE1P56817 501 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 UBXN2AP68543 259 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 BECN1Q14457 450 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 GPNMBQ14956 572 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 HERPUD1Q15011 391 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 PTGISQ16647 500 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 LRIT3Q3SXY7 679 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 PLEKHS1Q5SXH7 462 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.67□□□□□ -2.3
KTN1-211ENST00000553710 NEPROQ6NW34 567 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 RFPL4BQ6ZWI9 263 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 DET1Q7L5Y6 550 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 ARIH2OSQ8N7S6 290 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 ZNF671Q8TAW3 534 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 ZNF622Q969S3 477 aaKnown RBP eCLIP0.67□□□□□ -2.3
KTN1-211ENST00000553710 PYCR2Q96C36 320 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 TBATAQ96M53 351 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 TRIM7Q9C029 511 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 NOL11Q9H8H0 719 aaKnown RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 ELL3Q9HB65 397 aaPredicted RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 TIGARQ9NQ88 270 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 IARS2Q9NSE4 1012 aaKnown RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 ZNF446Q9NWS9 450 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 CRNNQ9UBG3 495 aaPredicted RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 PHF11Q9UIL8 331 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 MAGED1Q9Y5V3 778 aaPredicted RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 IQGAP1P46940 1657 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 ALPK3Q96L96 1907 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 SYNE2Q8WXH0 6885 aaKnown RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 TACC2O95359 2948 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 KMT2EQ8IZD2 1858 aa0.67□□□□□ -2.3
KTN1-211ENST00000553710 MACF1Q9UPN3 7388 aaKnown RBP0.67□□□□□ -2.3
KTN1-211ENST00000553710 PASKQ96RG2 1323 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 SETD5Q9C0A6 1442 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 RGPD3A6NKT7 1758 aaPredicted RBP0.66□□□□□ -2.3
KTN1-211ENST00000553710 RGPD4Q7Z3J3 1758 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 ANHXE9PGG2 379 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 DLGAP1O14490 977 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 CLDN4O14493 209 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 B4GALT2O60909 372 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 HPNP05981 417 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 FCGR3AP08637 254 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 LAMP1P11279 417 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 MAPK4P31152 587 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 CDH5P33151 784 aaPredicted RBP0.66□□□□□ -2.3
KTN1-211ENST00000553710 HERVK_113P61574 105 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 RPS8P62241 208 aaKnown RBP0.66□□□□□ -2.3
KTN1-211ENST00000553710 PAX5Q02548 391 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 SULT2A1Q06520 285 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 EGFEM1PQ0D2K5 195 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 CNTN1Q12860 1018 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 KRT32Q14532 448 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 PTPRCAPQ14761 206 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 MAPK11Q15759 364 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 ANKRD55Q3KP44 614 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 KRTAP20-1Q3LI63 56 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 TOR1AIP1Q5JTV8 583 aa0.66□□□□□ -2.3
KTN1-211ENST00000553710 ANKRD33Q7Z3H0 272 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms