RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 IGLV3-21P80748 117 aaPredicted RBP12.5□□□□□ -0.41
PRPF39-204ENST00000553605 PCDH1Q08174 1060 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 EBPQ15125 230 aaKnown RBP12.5□□□□□ -0.41
PRPF39-204ENST00000553605 OR2A2Q6IF42 318 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 RNF111Q6ZNA4 994 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 PEX26Q7Z412 305 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 P4HA3Q7Z4N8 544 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 VSTM4Q8IW00 320 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 ZNF669Q96BR6 464 aaPredicted RBP12.5□□□□□ -0.41
PRPF39-204ENST00000553605 REPS1Q96D71 796 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 NDNQ99608 321 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 MAPKAP1Q9BPZ7 522 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 KLHL4Q9C0H6 718 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 SPACA6W5XKT8 324 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 SVEP1Q4LDE5 3571 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 GRID2IPA4D2P6 1211 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 MIF4GDA9UHW6 222 aaKnown RBP12.49□□□□□ -0.41
PRPF39-204ENST00000553605 AKR1B15C9JRZ8 316 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-204ENST00000553605 CDC7O00311 574 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 CBFA2T2O43439 604 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 FGF17O60258 216 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 GMPRP36959 345 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 CDKN1AP38936 164 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 KIR2DL2P43627 348 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-204ENST00000553605 SLC6A12P48065 614 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 SLC37A1P57057 533 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 HERVK_113P63132 956 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 ERVK-8P63133 956 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 CDK16Q00536 496 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 TGM3Q08188 693 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 FUT7Q11130 342 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 BIKQ13323 160 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 KBTBD12Q3ZCT8 623 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 ARMC3Q5W041 872 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 BHLHB9Q6PI77 547 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 SBSNQ6UWP8 590 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 ANGPTL8Q6UXH0 198 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 ZNF610Q8N9Z0 462 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 OR14L1PQ8NHC6 308 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 PLPPR2Q96GM1 343 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 TMEM204Q9BSN7 226 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 ERVK-6Q9BXR3 956 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 FBXO5Q9UKT4 447 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 RNF112Q9ULX5 631 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 DLGAP4Q9Y2H0 992 aa12.49□□□□□ -0.41
PRPF39-204ENST00000553605 C2orf92A0A1B0GVN3 265 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 TCRBV7S3A2A0A539 114 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 MAGEB16A2A368 324 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 OR6C76A6NM76 312 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 HCRTR2O43614 444 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 CDH16O75309 829 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 CGAP01215 116 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 IGHV4-39P01824 125 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 SOD3P08294 240 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 ENO2P09104 434 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 SRD5A1P18405 259 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 GNAZP19086 355 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 TMED10P49755 219 aaKnown RBP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 LHX2P50458 406 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 IL2P60568 153 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 SIRPAP78324 504 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 PLIN5Q00G26 463 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 SLBPQ14493 270 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 ZNF267Q14586 743 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 SLCO4C1Q6ZQN7 724 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 LMNTD2Q8IXW0 634 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 CCDC170Q8IYT3 715 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 KRT78Q8N1N4 520 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 CALML6Q8TD86 181 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 TP53INP1Q96A56 240 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 ZNF845Q96IR2 970 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 F2RL3Q96RI0 385 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 RHNO1Q9BSD3 238 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 NT5DC2Q9H857 520 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 SNX15Q9NRS6 342 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 C20orf96Q9NUD7 363 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 PTBP2Q9UKA9 531 aaKnown RBP12.48□□□□□ -0.41
PRPF39-204ENST00000553605 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
PRPF39-204ENST00000553605 ZCWPW2A0A1B0GU75 182 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 CD8BP10966 210 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 ALOX15P16050 662 aaPredicted RBP12.47□□□□□ -0.41
PRPF39-204ENST00000553605 PPP3CBP16298 524 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 TPSB2P20231 275 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 CPN2P22792 545 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 KCNC1P48547 511 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 CASP9P55211 416 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 CDKN2DP55273 166 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 GFRA1P56159 465 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 TPSAB1Q15661 275 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 UBAP2Q5T6F2 1119 aaKnown RBP12.47□□□□□ -0.41
PRPF39-204ENST00000553605 CAVIN1Q6NZI2 390 aaKnown RBP12.47□□□□□ -0.41
PRPF39-204ENST00000553605 AAGABQ6PD74 315 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 ZNF793Q6ZN11 406 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms