RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 QRFPRQ96P65 431 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 NDNQ99608 321 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 WDR83Q9BRX9 315 aaKnown RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 NPLQ9BXD5 320 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 EPB41L4BQ9H329 900 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 LDAHQ9H6V9 325 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 PRTFDC1Q9NRG1 225 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 JKAMPQ9P055 326 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 MTRF1LQ9UGC7 380 aaKnown RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 TRMT6Q9UJA5 497 aaKnown RBP6.68□□□□□ -1.34
ATXN3-219ENST00000553488 FBXO5Q9UKT4 447 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 IKZF3Q9UKT9 509 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 PRR14LQ5THK1 2151 aa6.68□□□□□ -1.34
ATXN3-219ENST00000553488 A0A0G2JN53 185 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 TUBAL3A6NHL2 446 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 INAFM1C9JVW0 142 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 H7C1Q1 480 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 CLDN4O14493 209 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 EPPINO95925 133 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ATF4P18848 351 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-219ENST00000553488 GABRB3P28472 473 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 TIMP3P35625 211 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 MAGEA3P43357 314 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 KCNJ1P48048 391 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 RGS4P49798 205 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 CDKN2DP55273 166 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 BTN3A2P78410 334 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 THOC5Q13769 683 aaKnown RBP6.67□□□□□ -1.34
ATXN3-219ENST00000553488 CSHL1Q14406 222 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 PPP1R3AQ16821 1122 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF791Q3KP31 576 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ADPRMQ3LIE5 342 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 CASC4Q6P4E1 433 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 OPN5Q6U736 354 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 SBSNQ6UWP8 590 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 MAATS1Q7Z4T9 603 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 TMPRSS11BQ86T26 416 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 KIAA1328Q86T90 577 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 LACC1Q8IV20 430 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF595Q8IYB9 648 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 LRRC75A-AS1Q8N1F1 130 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 MYO1HQ8N1T3 1032 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 TMEM132CQ8N3T6 1108 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 TBC1D19Q8N5T2 526 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 MORN4Q8NDC4 146 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 NEIL3Q8TAT5 605 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 SLC2A12Q8TD20 617 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 PAQR8Q8TEZ7 354 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 KIAA1191Q96A73 305 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 MS4A6EQ96DS6 147 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 CAPZA3Q96KX2 299 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 SERPINB12Q96P63 405 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 AIF1LQ9BQI0 150 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 TSGA10Q9BZW7 698 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 OR8D2Q9GZM6 311 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ACKR4Q9NPB9 350 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 QPCTLQ9NXS2 382 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ARL15Q9NXU5 204 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ALKBH4Q9NXW9 302 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF629Q9UEG4 869 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-219ENST00000553488 GPR160Q9UJ42 338 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 CHCHD2Q9Y6H1 151 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-219ENST00000553488 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.67□□□□□ -1.34
ATXN3-219ENST00000553488 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
ATXN3-219ENST00000553488 MYOCOSA0A1B0GUC4 107 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 SYNDIG1LA6NDD5 238 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 MBD3L4A6NDZ8 208 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 MBD3L3A6NE82 208 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 MBD3L5A6NJ08 208 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 C17orf105B2RV13 164 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 ERI3O43414 337 aaKnown RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 ETHE1O95571 254 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 IGKV3-11P04433 115 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 P04436 131 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 TP53P04637 393 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 HIST1H2AGP0C0S8 130 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 MLNP12872 115 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 HIST1H2ADP20671 130 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 CERS1P27544 350 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 PGGT1BP53609 377 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 LIM2P55344 173 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 STXBP1P61764 594 aaKnown RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 SLC13A2Q13183 592 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 BMPR2Q13873 1038 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 MPEG1Q2M385 716 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 PIGGQ5H8A4 983 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 PRAMEF20Q5VT98 475 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 NSUN5P2Q63ZY6 315 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 KIF18BQ86Y91 864 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 C1QL4Q86Z23 238 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 C9orf40Q8IXQ3 194 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 KLHDC8AQ8IYD2 350 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 SIMC1Q8NDZ2 872 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 MBD3L2Q8NHZ7 208 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 NUBPLQ8TB37 319 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF721Q8TF20 911 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 ATL1Q8WXF7 558 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 SMPDL3BQ92485 455 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 DAZLQ92904 295 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms