RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ERLIN1O75477 346 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 BCAS2O75934 225 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-204ENST00000553324 OR6B1O95007 311 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 UNC5CO95185 931 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 STSP08842 583 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 MYZAPP0CAP1 466 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 MST1P26927 711 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 SERPINB3P29508 390 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 SOX3P41225 446 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 PER3P56645 1201 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 RAE1P78406 368 aaKnown RBP14.2□□□□□ -0.14
SHMT2-204ENST00000553324 C4orf17Q53FE4 359 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 HLA-DQA1Q5Y7H0 255 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 SCIMPQ6UWF3 145 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 C16orf47Q6ZP98 133 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-204ENST00000553324 MDGA2Q7Z553 956 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 CLYBLQ8N0X4 340 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 LRRC25Q8N386 305 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-204ENST00000553324 PSD4Q8NDX1 1056 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 C16orf78Q8WTQ4 265 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 KLHL29Q96CT2 875 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 GPR137Q96N19 417 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 WWTR1Q9GZV5 400 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 OR10A5Q9H207 317 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 SSU72Q9NP77 194 aaKnown RBP14.2□□□□□ -0.14
SHMT2-204ENST00000553324 EHD3Q9NZN3 535 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 SLC17A7Q9P2U7 560 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 OSGIN2Q9Y236 505 aa14.2□□□□□ -0.14
SHMT2-204ENST00000553324 NPIPB8E9PQR5 432 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 ASNA1O43681 348 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 SEMA7AO75326 666 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 IL3P08700 152 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 NEFHP12036 1026 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF24P17028 368 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 CNR1P21554 472 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 PRPH2P23942 346 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 MPIP34949 423 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 FEN1P39748 380 aaKnown RBP14.19□□□□□ -0.14
SHMT2-204ENST00000553324 CASP6P55212 293 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 PMP22Q01453 160 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 SRSF11Q05519 484 aaKnown RBP14.19□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF763Q0D2J5 394 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 EBPQ15125 230 aaKnown RBP14.19□□□□□ -0.14
SHMT2-204ENST00000553324 PRICKLE4Q2TBC4 344 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 LRIG3Q6UXM1 1119 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 RGS9BPQ6ZS82 235 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 VWA5B2Q8N398 1253 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 CPSF7Q8N684 471 aaKnown RBP14.19□□□□□ -0.14
SHMT2-204ENST00000553324 ZFP62Q8NB50 900 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-204ENST00000553324 C17orf47Q8NEP4 570 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 C16orf52Q8NHV5 167 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 ERP27Q96DN0 273 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF681Q96N22 645 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 CCT7Q99832 543 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 SACM1LQ9NTJ5 587 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 TRAF6Q9Y4K3 522 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 ACTL7BQ9Y614 415 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 FLNCQ14315 2725 aa14.19□□□□□ -0.14
SHMT2-204ENST00000553324 WIPF3A6NGB9 483 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 NPIPA5E9PKD4 350 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 TM9SF1O15321 606 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 SEC22BO75396 215 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 P04436 131 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 BPGMP07738 259 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 DDCP20711 480 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 SSTR4P31391 388 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 MEOX1P50221 254 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 NRG3P56975 720 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 KCNK10P57789 538 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF791Q3KP31 576 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-204ENST00000553324 ARL13AQ5H913 290 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-204ENST00000553324 CEP85LQ5SZL2 805 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 SLC22A10Q63ZE4 541 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 CLEC6AQ6EIG7 209 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 NOXRED1Q6NXP6 359 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 NUDCD3Q8IVD9 361 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 GHDCQ8N2G8 530 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 ZNF615Q8N8J6 731 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 PSMG3-AS1Q96PY0 264 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 GAL3ST4Q96RP7 486 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 FAM173AQ9BQD7 235 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 BRINP2Q9C0B6 783 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 STMN4Q9H169 189 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-204ENST00000553324 CENPHQ9H3R5 247 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 PFDN4Q9NQP4 134 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 SLC35C2Q9NQQ7 365 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 C1orf109Q9NX04 203 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 CNIH4Q9P003 139 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 HEY2Q9UBP5 337 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 PRODH2Q9UF12 536 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 NPIPA1Q9UND3 350 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 ENTPD4Q9Y227 616 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 TMED5Q9Y3A6 229 aa14.18□□□□□ -0.14
SHMT2-204ENST00000553324 POLEQ07864 2286 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 A0A1W2PS29 197 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 TFECO14948 347 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-204ENST00000553324 LRRTM2O43300 516 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 SNUPNO95149 360 aaKnown RBP14.17□□□□□ -0.14
SHMT2-204ENST00000553324 CT62P0C5K7 136 aa14.17□□□□□ -0.14
SHMT2-204ENST00000553324 CREB1P16220 341 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms