RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PRR5P85299 388 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 ELOAQ14241 798 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 GRM7Q14831 915 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 REEP3Q6NUK4 255 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 ZNF574Q6ZN55 896 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 KMT5CQ86Y97 462 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 SLC30A8Q8IWU4 369 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 OR7G2Q8NG99 324 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 OR5D16Q8NGK9 328 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 MIPOL1Q8TD10 442 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 ANKRD9Q96BM1 317 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 VCXQ9H320 206 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 DNAJB9Q9UBS3 223 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 ANGPT4Q9Y264 503 aa18.37■□□□□ 0.53
RBFOX1-215ENST00000553186 UNC13CQ8NB66 2214 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 C7orf72A4D263 438 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 A8MU76 341 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 H0YJX3 145 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 M0QX08 132 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 PLOD2O00469 737 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 CST1P01037 141 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 ATP1B1P05026 303 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 RPSAP08865 295 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 MSL3P1P0C860 447 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 OR12D1P0DN82 309 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 FOLR1P15328 257 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 NELFEP18615 380 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 SELENOWP63302 87 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 KCNJ10P78508 379 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 MRPS35P82673 323 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 LASP1Q14847 261 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 TMEM71Q6P5X7 295 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 CBR4Q8N4T8 237 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 GIMAP5Q96F15 307 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 VPS50Q96JG6 964 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 ZNF597Q96LX8 424 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 DOHHQ9BU89 302 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 C3orf14Q9HBI5 128 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 ADPRHL2Q9NX46 363 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 THUMPD1Q9NXG2 353 aaKnown RBP18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 HCN3Q9P1Z3 774 aa18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 TMEM184BQ9Y519 407 aaPredicted RBP18.36■□□□□ 0.53
RBFOX1-215ENST00000553186 A0A1W2PQM1 296 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 TMEM150CB9EJG8 249 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 SUV39H1O43463 412 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 PCDHGA12O60330 932 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 OPN1SWP03999 348 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 BCHEP06276 602 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 UQCRBP14927 111 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 ARL4DP49703 201 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 ZDHHC21Q8IVQ6 265 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 NUP43Q8NFH3 380 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 C16orf58Q96GQ5 468 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 TMEM19Q96HH6 336 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 TPD52L3Q96J77 140 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 C9orf16Q9BUW7 83 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 ZNF768Q9H5H4 540 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 ATXN7L1Q9ULK2 861 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 OR2B3O76000 313 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 RNH1P13489 461 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 GCGRP47871 477 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 VLDLRP98155 873 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 MAT1AQ00266 395 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 IQCCQ4KMZ1 466 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 ZNF628Q5EBL2 1059 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 TLDC1Q6P9B6 456 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 FAM111BQ6SJ93 734 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 FKBP9P1Q75LS8 142 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 OR2L13Q8N349 312 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 TMBIM1Q969X1 311 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 CLK4Q9HAZ1 481 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 GMEB2Q9UKD1 530 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 ADAMTS9Q9P2N4 1935 aa18.35■□□□□ 0.53
RBFOX1-215ENST00000553186 MYOCOSA0A1B0GUC4 107 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 TOX3O15405 576 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 PGM3O95394 542 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 SYPP08247 313 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 MAN2A2P49641 1150 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 CLCN2P51788 898 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 CCL7P80098 99 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 SYT16Q17RD7 645 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 PACRGLQ8N7B6 248 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 OR1L3Q8NH93 324 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 XAGE5Q8WWM1 108 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 C7orf34Q96L11 122 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 YIPF4Q9BSR8 244 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 SMOC1Q9H4F8 434 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 PDP2Q9P2J9 529 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 TRPC4Q9UBN4 977 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 ABCG2Q9UNQ0 655 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 WDR87Q6ZQQ6 2873 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 H0YIG0 161 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 RASAL1O95294 804 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 KHKP50053 298 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 RPS26P11Q5JNZ5 115 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 PATL1Q86TB9 770 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 SLC44A2Q8IWA5 706 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 SIMC1Q8NDZ2 872 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 NAT6Q93015 286 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 876 ms