RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 KDELR1P24390 212 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 EEF1GP26641 437 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PSMB5P28074 263 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 CCR7P32248 378 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 FOXN2P32314 431 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 GMPRP36959 345 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PIGAP37287 484 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 STT3AP46977 705 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 SLC6A12P48065 614 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 GPR143P51810 404 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 MAP2K6P52564 334 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 NUDT6P53370 316 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 EIF3BP55884 814 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 ARL4CP56559 192 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 RAB1AP62820 205 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 TPM4P67936 248 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 BTG2P78543 158 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 TEKQ02763 1124 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 CRYZQ08257 329 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 FOXF2Q12947 444 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 TRIM25Q14258 630 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 FGFBP1Q14512 234 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 RAB35Q15286 201 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 NKPD1Q17RQ9 610 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 DPCR1Q3MIW9 517 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 CYP27C1Q4G0S4 372 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 NHSL2Q5HYW2 709 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 ICE2Q659A1 982 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 OR2A2Q6IF42 318 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 ENPP6Q6UWR7 440 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 CHMP1BQ7LBR1 199 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 SLC15A4Q8N697 577 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PLD5Q8N7P1 536 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 BANPQ8N9N5 519 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 C9orf106Q8NAJ2 232 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 FBXO15Q8NCQ5 510 aaPredicted RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 OR13C4Q8NGS5 318 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 OR9A1PQ8NGU1 263 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 OR8K3Q8NH51 312 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF418Q8TF45 676 aaPredicted RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 FAM216AQ8WUB2 273 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 STYXQ8WUJ0 223 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 DAZLQ92904 295 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 NCLNQ969V3 563 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PGM2Q96G03 612 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 WDYHV1Q96HA8 205 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 MARK4Q96L34 752 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 UBXN10Q96LJ8 280 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PRAP1Q96NZ9 151 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PPP1R2P1Q96PQ5 205 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 JMJD8Q96S16 334 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 SERINC2Q96SA4 455 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 BPIFA3Q9BQP9 254 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF747Q9BV97 191 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 RBM4Q9BWF3 364 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 SLC6A15Q9H2J7 730 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 NGBQ9NPG2 151 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 SEMA4BQ9NPR2 832 aaPredicted RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 TRMT1Q9NXH9 659 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PRSS50Q9UI38 385 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 LCMT1Q9UIC8 334 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PTBP2Q9UKA9 531 aaKnown RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 SNX8Q9Y5X2 465 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 IKBKGQ9Y6K9 419 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 PRSS21Q9Y6M0 314 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 CLCA3PQ9Y6N3 262 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 IGHV4-30-2A0A087WSY4 118 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 A0A0G2JMM0 328 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 A0A1W2PPB8 328 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 A0A1W2PRS3 328 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 URADA6NGE7 173 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 PRSS47A8MTI9 375 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 KIR3DP1A8MWS1 328 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF487B1APH4 448 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 GNB5O14775 395 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 P2RX6O15547 441 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 PHGDHO43175 533 aaKnown RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 NRP2O60462 931 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 SNX4O95219 450 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 SERPINC1P01008 464 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 HPNP05981 417 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 CSF3P09919 207 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 SLC35G6P0C7Q6 338 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 RNH1P13489 461 aaKnown RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 CPN1P15169 458 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 TNNI3P19429 210 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 PCMT1P22061 227 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 IGFBP5P24593 272 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 GDF1P27539 372 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 AOAHP28039 575 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 LOXP28300 417 aaPredicted RBP4.68□□□□□ -1.66
CKAP4-203ENST00000553039 CDKN1AP38936 164 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 LIMS1P48059 325 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 HSPA7P48741 367 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 CLCN7P51798 805 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 LGALS4P56470 323 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 DAG1Q14118 895 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 TOMM20Q15388 145 aa4.68□□□□□ -1.66
CKAP4-203ENST00000553039 MPEG1Q2M385 716 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms