RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	REEP3	Q6NUK4	255 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZC3H14	Q6PJT7	736 aa	Known RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	TMPRSS9	Q7Z410	1059 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	GALNT10	Q86SR1	603 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	PATL1	Q86TB9	770 aa	Known RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF595	Q8IYB9	648 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	GPR135	Q8IZ08	494 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	KAT2A	Q92830	837 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	EME1	Q96AY2	570 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF501	Q96CX3	271 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	MVB12A	Q96EY5	273 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	MMAB	Q96EY8	250 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	MAGED4	Q96JG8	741 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	HSH2D	Q96JZ2	352 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	MS4A4E	Q96PG1	132 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	BDH2	Q9BUT1	245 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	SMOC1	Q9H4F8	434 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	P2RX2	Q9UBL9	471 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	RAB23	Q9ULC3	237 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF451	Q9Y4E5	1061 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	PCDHGB2	Q9Y5G2	931 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	GON4L	Q3T8J9	2241 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	CACNA1E	Q15878	2313 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	FAM149A	A5PLN7	773 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	SAC3D1	A6NKF1	404 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480		H0YJX3	145 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	UPK1A	O00322	258 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	CASC3	O15234	703 aa	Known RBP	11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	SUV39H1	O43463	412 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	ASNA1	O43681	348 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	PRSS23	O95084	383 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	BMP10	O95393	424 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	MT-ND1	P03886	318 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	HMGN2	P05204	90 aa	Known RBP	11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	BCHE	P06276	602 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	TFPT	P0C1Z6	253 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	SLC35E2	P0CK97	266 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR12D1	P0DN82	309 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	AQP1	P29972	269 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	CLCN2	P51788	898 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	CRYBA2	P53672	197 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	PRKAG1	P54619	331 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	ARSF	P54793	590 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	AQP4	P55087	323 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	ID2	Q02363	134 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	COL9A2	Q14055	689 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF628	Q5EBL2	1059 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	PLA2G2C	Q5R387	149 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	ARHGAP22	Q7Z5H3	698 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	SHISA5	Q8N114	240 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	LGI4	Q8N135	537 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR2L13	Q8N349	312 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	PACRGL	Q8N7B6	248 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	ICA1L	Q8NDH6	482 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR7G2	Q8NG99	324 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF675	Q8TD23	568 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	SLC38A5	Q8WUX1	472 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	RAB8B	Q92930	207 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	COL26A1	Q96A83	441 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	PEX11G	Q96HA9	241 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	TMEM19	Q96HH6	336 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	C9orf16	Q9BUW7	83 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	C8orf4	Q9NR00	106 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	DDX18	Q9NVP1	670 aa	Known RBP	11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	TRPC4	Q9UBN4	977 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	DNAJB9	Q9UBS3	223 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	SERTAD3	Q9UJW9	196 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	CDC14A	Q9UNH5	594 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	SCN3A	Q9NY46	2000 aa		11.91	□□□□□ -0.5
CACNB3-223	ENST00000552480	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480		A0A087WV62	115 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	IGHV5-10-1	A0A0J9YXX1	117 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	CLDN4	O14493	209 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	DSCR3	O14972	297 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF749	O43361	778 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	CTNS	O60931	367 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	PDE9A	O76083	593 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF26	P17031	533 aa	Predicted RBP	11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	GRK6	P43250	576 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	HSPA13	P48723	471 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	MAPK10	P53779	464 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	SELENOW	P63302	87 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	IGLV3-21	P80748	117 aa	Predicted RBP	11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	MAT1A	Q00266	395 aa	Known RBP	11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	ACY1	Q03154	408 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	GNA13	Q14344	377 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	LASP1	Q14847	261 aa	Known RBP	11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	MAPK11	Q15759	364 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	FHL5	Q5TD97	284 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	LAIR1	Q6GTX8	287 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	TCEAL6	Q6IPX3	200 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	TTLL10	Q6ZVT0	673 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	VTCN1	Q7Z7D3	282 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	EPHX4	Q8IUS5	362 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZDHHC21	Q8IVQ6	265 aa		11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	METTL27	Q8N6F8	245 aa	Predicted RBP	11.9	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR5D16	Q8NGK9	328 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms