RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 POLR3HQ9Y535 204 aaPredicted RBP16.12■□□□□ 0.17
CDK4-208ENST00000551706 SCN2AQ99250 2005 aa16.12■□□□□ 0.17
CDK4-208ENST00000551706 POLQO75417 2590 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 TRAV17A0A0B4J275 112 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 ERAL1O75616 437 aaKnown RBP16.11■□□□□ 0.17
CDK4-208ENST00000551706 SORBS2O94875 1100 aaKnown RBP16.11■□□□□ 0.17
CDK4-208ENST00000551706 WDPCPO95876 746 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 IGKV3-11P04433 115 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 DDCP20711 480 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 TNFSF10P50591 281 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 RPL14P50914 215 aaKnown RBP16.11■□□□□ 0.17
CDK4-208ENST00000551706 MLF1P58340 268 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 C2orf80Q0P641 193 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 ZNF169Q14929 603 aaPredicted RBP16.11■□□□□ 0.17
CDK4-208ENST00000551706 ATP6AP1LQ52LC2 224 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 TTMPQ5BVD1 217 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 XKR7Q5GH72 579 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 GALNT12Q8IXK2 581 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 MMP21Q8N119 569 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 BEST3Q8N1M1 668 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 ZNF781Q8N8C0 355 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 OR5L2Q8NGL0 311 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 SUN3Q8TAQ9 357 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDK4-208ENST00000551706 ZNF721Q8TF20 911 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 C19orf60Q96EN9 201 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 NPAS2Q99743 824 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 UTP23Q9BRU9 249 aaKnown RBP16.11■□□□□ 0.17
CDK4-208ENST00000551706 CNPPD1Q9BV87 410 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDK4-208ENST00000551706 CXorf21Q9HAI6 301 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 THAP1Q9NVV9 213 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 HEY2Q9UBP5 337 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 DOCK10Q96BY6 2186 aa16.11■□□□□ 0.17
CDK4-208ENST00000551706 TNRC6AQ8NDV7 1962 aaKnown RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 TTLL8A6PVC2 850 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 GABRR3A8MPY1 467 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 SKAP2O75563 359 aaPredicted RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 ATP1B1P05026 303 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 MAPK1P28482 360 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 ERVK-8P63133 956 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 RPL38P63173 70 aaKnown RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 ZNF267Q14586 743 aaPredicted RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 PLEKHN1Q494U1 663 aaPredicted RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 GALNTL6Q49A17 601 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 RFTN2Q52LD8 501 aaPredicted RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 FAM71E1Q6IPT2 247 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 LRRC25Q8N386 305 aaPredicted RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 HORMAD2Q8N7B1 307 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 Q8NA96 180 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 CDC26Q8NHZ8 85 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 SORT1Q99523 831 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 C20orf27Q9GZN8 174 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 MANSC1Q9H8J5 431 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 ZNF395Q9H8N7 513 aaPredicted RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 MIEF1Q9NQG6 463 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 RYDENQ9NUL5 291 aaKnown RBP16.1■□□□□ 0.17
CDK4-208ENST00000551706 PLA2G3Q9NZ20 509 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 ERVK-19Q9WJR5 959 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 ENTPD4Q9Y227 616 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 CSAG2Q9Y5P2 127 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 OTOGQ6ZRI0 2925 aa16.1■□□□□ 0.17
CDK4-208ENST00000551706 OR6C76A6NM76 312 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 NT5EP21589 574 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 FEN1P39748 380 aaKnown RBP16.09■□□□□ 0.17
CDK4-208ENST00000551706 ASMTP46597 345 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 RNF4P78317 190 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 TUBA3CQ13748 450 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 TUBA3EQ6PEY2 450 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 RNF111Q6ZNA4 994 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 DGAT2L6Q6ZPD8 337 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 SLC29A4Q7RTT9 530 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 NUBPLQ8TB37 319 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 CPT1CQ8TCG5 803 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 THAP3Q8WTV1 239 aaPredicted RBP16.09■□□□□ 0.17
CDK4-208ENST00000551706 CNRIP1Q96F85 164 aaPredicted RBP16.09■□□□□ 0.17
CDK4-208ENST00000551706 ZNF681Q96N22 645 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 SLC35C2Q9NQQ7 365 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 TAS2R7Q9NYW3 318 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 MYOTQ9UBF9 498 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 YARS2Q9Y2Z4 477 aaKnown RBP16.09■□□□□ 0.17
CDK4-208ENST00000551706 PCDHGA10Q9Y5H3 936 aa16.09■□□□□ 0.17
CDK4-208ENST00000551706 ATP6AP2A0A1C7CYW4 349 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 A0A1W2PS29 197 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 KLF11O14901 512 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 MAN1A2O60476 641 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 PEX11AO75192 247 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 SNNO75324 88 aaPredicted RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 ITGA10O75578 1167 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 ATP6AP2O75787 350 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 SASH3O75995 380 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 DDX5P17844 614 aaKnown RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 SDC1P18827 310 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 MPIP34949 423 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 TRHRP34981 398 aaPredicted RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 CYB561P49447 251 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 OC90Q02509 493 aaPredicted RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 MAP4K2Q12851 820 aa16.08■□□□□ 0.16
CDK4-208ENST00000551706 MAD2L1Q13257 205 aaPredicted RBP16.08■□□□□ 0.16
CDK4-208ENST00000551706 ESPL1Q14674 2120 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms