RNA–Protein interactions for RNA: ENST00000550857.5

PTPRB-209, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-209ENST00000550857 SULT2B1O00204 365 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TBX1O43435 398 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 NUDT21O43809 227 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 METTL18O95568 372 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF829Q3KNS6 432 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SWT1Q5T5J6 900 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 STPG1Q5TH74 334 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 Q7L0L9 218 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 UBQLNLQ8IYU4 475 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 CLHC1Q8NHS4 586 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 OMA1Q96E52 524 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 WDR55Q9H6Y2 383 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SMURF1Q9HCE7 757 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 REXO2Q9Y3B8 237 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ARGFXA6NJG6 315 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 CCL22O00626 93 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 KIF1CO43896 1103 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 AGFG2O95081 481 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 TNFAIP8O95379 198 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 GPR75O95800 540 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 CRABP1P29762 137 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 NR0B1P51843 470 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 SLC35A1P78382 337 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 POU4F2Q12837 409 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 NAIF1Q69YI7 327 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZCCHC23Q6ZST2 131 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ZFAND4Q86XD8 727 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 GATA5Q9BWX5 397 aaPredicted RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 NT5DC2Q9H857 520 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 MTMR10Q9NXD2 777 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 ING3Q9NXR8 418 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 EBF1Q9UH73 591 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 KLHL21Q9UJP4 597 aa7.67□□□□□ -1.18
PTPRB-209ENST00000550857 RPL36Q9Y3U8 105 aaKnown RBP7.67□□□□□ -1.18
PTPRB-209ENST00000550857 BRWD3Q6RI45 1802 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ENO4A6NNW6 628 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 CLIC1O00299 241 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 NME1P15531 152 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 MAGP20916 626 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 FAM174BQ3ZCQ3 159 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ACSBG2Q5FVE4 666 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ARL13AQ5H913 290 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 SPIN3Q5JUX0 258 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 SUSD1Q6UWL2 747 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 RTN4RL1Q86UN2 441 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF676Q8N7Q3 588 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 BCORP1Q8N888 145 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 LRRC57Q8N9N7 239 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 POLR2J3Q9H1A7 115 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 C6orf106Q9H6K1 298 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 TCF7L1Q9HCS4 588 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ARMCX1Q9P291 453 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 TAF1LQ8IZX4 1826 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 MRPL33O75394 65 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 IL1RNP18510 177 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 FECHP22830 423 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 IL3RAP26951 378 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 GKP32189 559 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ACTC1P68032 377 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ACTA1P68133 377 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 IRF9Q00978 393 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 DBPQ10586 325 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 KCNJ11Q14654 390 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 LASP1Q14847 261 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 PDK3Q15120 406 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 LILRA6Q6PI73 481 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 BTLAQ7Z6A9 289 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 DPPA2Q7Z7J5 298 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 TTC9BQ8N6N2 239 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ANKK1Q8NFD2 765 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 OR5K2Q8NHB8 316 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 CHFRQ96EP1 664 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ADAD1Q96M93 576 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 MCHR1Q99705 422 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 MAPKAP1Q9BPZ7 522 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 CLEC4MQ9H2X3 399 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ZNF860A6NHJ4 632 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 PDYNP01213 254 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ANXA2P07355 339 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 PTGER4P35408 488 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 IDUAP35475 653 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ATG9BQ674R7 924 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ARHGAP36Q6ZRI8 547 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 GID4Q8IVV7 300 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 SFRP1Q8N474 314 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 DNAAF1Q8NEP3 725 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 MENTQ9BUN1 341 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 SPRTNQ9H040 489 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 PLAGL1Q9UM63 463 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 SLC22A23A1A5C7 686 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 FOXO6A8MYZ6 492 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 K7ERQ8 282 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 M0R129 80 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 SELEP16581 610 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 HMGA1P17096 107 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 GSTT1P30711 240 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 MAZP56270 477 aaKnown RBP7.66□□□□□ -1.18
PTPRB-209ENST00000550857 IHHQ14623 411 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 ZSWIM9Q86XI8 627 aa7.66□□□□□ -1.18
PTPRB-209ENST00000550857 MMP21Q8N119 569 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms