RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SGO1Q5FBB7 561 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 CGB2Q6NT52 195 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 Q6ZSR9 355 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 MAVSQ7Z434 540 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 RNF175Q8N4F7 328 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 APCDD1LQ8NCL9 501 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 ADAMTS18Q8TE60 1221 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 STON2Q8WXE9 905 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 MTFMTQ96DP5 389 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 MS4A6EQ96DS6 147 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 CMTM7Q96FZ5 175 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 VMP1Q96GC9 406 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 CSF3RQ99062 836 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 MTERF1Q99551 399 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 ACPTQ9BZG2 426 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 LIN28AQ9H9Z2 209 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 MEAF6Q9HAF1 191 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 FGFR1OP2Q9NVK5 253 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 MARCOQ9UEW3 520 aaPredicted RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 ZNF223Q9UK11 482 aaPredicted RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 ERVK-11Q9UQG0 969 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 MRPS33Q9Y291 106 aaKnown RBP12.47□□□□□ -0.41
NUP188-211ENST00000550219 FIS1Q9Y3D6 152 aa12.47□□□□□ -0.41
NUP188-211ENST00000550219 CRYBG3Q68DQ2 2970 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 CELSR2Q9HCU4 2923 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 GMNCA6NCL1 334 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 LRIT2A6NDA9 550 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SLC28A1O00337 649 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 CLDN4O14493 209 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 PIP5K1BO14986 540 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 PEX1O43933 1283 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 HS6ST1O60243 411 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 ETHE1O95571 254 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 IFNA16P05015 189 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 KITP10721 976 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 DRD4P21917 467 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 PRPH2P23942 346 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 TRHRP34981 398 aaPredicted RBP12.46□□□□□ -0.41
NUP188-211ENST00000550219 SSR4P51571 173 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 ARFIP1P53367 373 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SEC24CP53992 1094 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 TMEM35AQ53FP2 167 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 DEPDC1Q5TB30 811 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SCIMPQ6UWF3 145 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 C16orf47Q6ZP98 133 aaPredicted RBP12.46□□□□□ -0.41
NUP188-211ENST00000550219 FGD2Q7Z6J4 655 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 CD163Q86VB7 1156 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SULF2Q8IWU5 870 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SCUBE1Q8IWY4 988 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 OR2L5Q8NG80 312 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SDCCAG3Q96C92 435 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 MAELQ96JY0 434 aaKnown RBP12.46□□□□□ -0.41
NUP188-211ENST00000550219 C3orf30Q96M34 536 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SERPINI1Q99574 410 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 SIKE1Q9BRV8 207 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
NUP188-211ENST00000550219 REXO4Q9GZR2 422 aaKnown RBP12.46□□□□□ -0.41
NUP188-211ENST00000550219 ADAP2Q9NPF8 381 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 PFDN4Q9NQP4 134 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 KCMF1Q9P0J7 381 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 PTGDR2Q9Y5Y4 395 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 USH1CQ9Y6N9 552 aa12.46□□□□□ -0.41
NUP188-211ENST00000550219 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 A0A1B0GTH9 108 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 TRPC5OSA6NMA1 111 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 A8MVJ9 347 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 KLRC4-KLRK1H3BQV0 150 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 SDHDO14521 159 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 PRKNO60260 465 aaPredicted RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 SH3BGRLO75368 114 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 SKAP2O75563 359 aaPredicted RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 RSL1D1O76021 490 aaKnown RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 SEMA3DO95025 777 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 TGFB1P01137 390 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 LINC00032P0C843 101 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 MTTPP55157 894 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 HSD17B7P56937 341 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 TBL3Q12788 808 aaKnown RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 DDX39BQ13838 428 aaKnown RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 TERF2Q15554 542 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 PDCD2Q16342 344 aaPredicted RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 KHDRBS2Q5VWX1 349 aaKnown RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 MYO7BQ6PIF6 2116 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 EPGNQ6UW88 154 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 CHSY3Q70JA7 882 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 MDGA2Q7Z553 956 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 UBE3DQ7Z6J8 389 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 DOLPP1Q86YN1 238 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 CHERPQ8IWX8 916 aaKnown RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 DDIASQ8IXT1 998 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 POGLUT1Q8NBL1 392 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 OR2T11Q8NH01 316 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 ASB15Q8WXK1 588 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 C11orf24Q96F05 449 aaPredicted RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 METTL2AQ96IZ6 378 aaKnown RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 LURAP1Q96LR2 239 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 QRFPRQ96P65 431 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 SERINC2Q96SA4 455 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms