RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 ARHGEF15O94989 841 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 GSTM2P28161 218 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 ODF4Q2M2E3 257 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 LCN1P1Q5VSP4 162 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 ADGRD2Q7Z7M1 963 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 RASGRP3Q8IV61 690 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 OR2L2Q8NH16 312 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 CLEC4MQ9H2X3 399 aaPredicted RBP15.48■□□□□ 0.07
CUX1-213ENST00000549414 NMNAT1Q9HAN9 279 aaPredicted RBP15.48■□□□□ 0.07
CUX1-213ENST00000549414 LYARQ9NX58 379 aaKnown RBP15.48■□□□□ 0.07
CUX1-213ENST00000549414 A0A075B6Q4 140 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 GRXCR2A6NFK2 248 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 C2orf74A8MZ97 194 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 MAGEB3O15480 346 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 RCBTB2O95199 551 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 RLN1P04808 185 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 MC3RP41968 323 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 SLC15A1P46059 708 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 VLDLRP98155 873 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 IRF4Q15306 451 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 UGT8Q16880 541 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 UGT3A2Q3SY77 523 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 LRRC25Q8N386 305 aaPredicted RBP15.48■□□□□ 0.07
CUX1-213ENST00000549414 CSNK1A1LQ8N752 337 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 PIK3R3Q92569 461 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 TESCQ96BS2 214 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 S100A13Q99584 98 aa15.48■□□□□ 0.07
CUX1-213ENST00000549414 HMGN2P05204 90 aaKnown RBP15.47■□□□□ 0.07
CUX1-213ENST00000549414 MMP12P39900 470 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 ABATP80404 500 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 NXPE3Q969Y0 559 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 ZNF221Q9UK13 617 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 A0A1B0GTW7 788 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 ZNF3P17036 446 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 GCGRP47871 477 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 VEZF1Q14119 521 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 GTF2IRD2BQ6EKJ0 949 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 FIGLAQ6QHK4 219 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 GTF2IRD2Q86UP8 949 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 OR52E1Q8NGJ3 308 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 A0A1B0GVT2 93 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 J3KTA2 159 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 DRD2P14416 443 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 JUNDP17535 347 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 HRH2P25021 359 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 P2RY2P41231 377 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 STAT5AP42229 794 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 RHAGQ02094 409 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 RPA4Q13156 261 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 E2F2Q14209 437 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.47■□□□□ 0.07
CUX1-213ENST00000549414 FAM43BQ6ZT52 329 aaPredicted RBP15.47■□□□□ 0.07
CUX1-213ENST00000549414 SLC9B2Q86UD5 537 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 SPARTQ8N0X7 666 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 LINC00471Q8N535 108 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 SUN3Q8TAQ9 357 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 TUBA1CQ9BQE3 449 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 APOOQ9BUR5 198 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 PMF1-BGLAPU3KQ54 211 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 ATG2BQ96BY7 2078 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 RNASET2O00584 256 aaKnown RBP15.47■□□□□ 0.07
CUX1-213ENST00000549414 CSF2P04141 144 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 PSKH1P11801 424 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 BMXP51813 675 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 POU6F2P78424 691 aaPredicted RBP15.47■□□□□ 0.07
CUX1-213ENST00000549414 DTX3Q8N9I9 347 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 OR8J1Q8NGP2 316 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 OR9A2Q8NGT5 310 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 SPATA9Q9BWV2 254 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 IL21Q9HBE4 155 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 C14orf119Q9NWQ9 140 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 TAS2R7Q9NYW3 318 aa15.47■□□□□ 0.07
CUX1-213ENST00000549414 H0YC42 278 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 ALPLP05186 524 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 PVRP15151 417 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 DDCP20711 480 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 CCR2P41597 374 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 MAP4K2Q12851 820 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 TMEM35AQ53FP2 167 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 XKR7Q5GH72 579 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 ZC3H14Q6PJT7 736 aaKnown RBP15.46■□□□□ 0.07
CUX1-213ENST00000549414 SPATC1Q76KD6 591 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 MOSPD2Q8NHP6 518 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 PTCHD1Q96NR3 888 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 TGM7Q96PF1 710 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 TRNT1Q96Q11 434 aaKnown RBP15.46■□□□□ 0.07
CUX1-213ENST00000549414 TMEM165Q9HC07 324 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 GDE1Q9NZC3 331 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 IL37Q9NZH6 218 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 VILLO15195 856 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 BCAS1O75363 584 aaPredicted RBP15.46■□□□□ 0.07
CUX1-213ENST00000549414 GADD45AP24522 165 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 SLC5A2P31639 672 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 PSMD4P55036 377 aaKnown RBP15.46■□□□□ 0.07
CUX1-213ENST00000549414 HNRNPA0Q13151 305 aaKnown RBP15.46■□□□□ 0.07
CUX1-213ENST00000549414 SPHARQ15513 63 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 SLC36A4Q6YBV0 504 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 ACOT4Q8N9L9 421 aa15.46■□□□□ 0.07
CUX1-213ENST00000549414 CHDHQ8NE62 594 aaPredicted RBP15.46■□□□□ 0.07
CUX1-213ENST00000549414 OLAHQ9NV23 265 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms