RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 RTL4Q6ZR62 310 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 GK5Q6ZS86 529 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 SEM1Q6ZVN7 128 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 TRILQ7L0X0 811 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 TRMT10CQ7L0Y3 403 aaKnown RBP11.22□□□□□ -0.61
DDX54-206ENST00000549271 RNF175Q8N4F7 328 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 TMEM151AQ8N4L1 468 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 FAM47BQ8NA70 645 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 SRFBP1Q8NEF9 429 aaKnown RBP11.22□□□□□ -0.61
DDX54-206ENST00000549271 OR5L2Q8NGL0 311 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 UBE2E3Q969T4 207 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 LRRC46Q96FV0 321 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 KCNC2Q96PR1 638 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 CSF3RQ99062 836 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 PIP5K1AQ99755 562 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 FAM173AQ9BQD7 235 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 CNPPD1Q9BV87 410 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 ALOXE3Q9BYJ1 711 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 TTTY12Q9BZ98 90 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 EPB41L4BQ9H329 900 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 IL1RL2Q9HB29 575 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 CPSF2Q9P2I0 782 aaKnown RBP11.22□□□□□ -0.61
DDX54-206ENST00000549271 IKBKGQ9Y6K9 419 aa11.22□□□□□ -0.61
DDX54-206ENST00000549271 KIAA1549Q9HCM3 1950 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 HSPB2A8KAH6 182 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 RTCAO00442 366 aaKnown RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 RIPK2O43353 540 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 SUSD5O60279 629 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 SH3BGRLO75368 114 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 SCELO95171 688 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 F12P00748 615 aaPredicted RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 TGFB1P01137 390 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 IFNA16P05015 189 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 SNRPAP09012 282 aaKnown RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 RBP1P09455 135 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 SBK3P0C264 359 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 PCNAP12004 261 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 COL6A2P12110 1019 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 GABRA1P14867 456 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 ATP5A1P25705 553 aaKnown RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 CNTFP26441 200 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 RNF4P78317 190 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 PLGLB1Q02325 96 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 FOXO1Q12778 655 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 STX4Q12846 297 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 GTF2H2Q13888 395 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 HSPB2Q16082 182 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 MPEG1Q2M385 716 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 DEPDC1Q5TB30 811 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 LIPJQ5W064 366 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 GTF2H2CQ6P1K8 395 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 METTL2BQ6P1Q9 378 aaKnown RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 OPN5Q6U736 354 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 TIFABQ6ZNK6 161 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 GOLGA7Q7Z5G4 137 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 CLNKQ7Z7G1 428 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 FAM109AQ8N4B1 249 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 PTGR2Q8N8N7 351 aaPredicted RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 L3MBTL4Q8NA19 623 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 NAXEQ8NCW5 288 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 HUS1BQ8NHY5 278 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 SCYL1Q96KG9 808 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 TBCDQ9BTW9 1192 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 OR51B5Q9H339 312 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 IPPKQ9H8X2 491 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 COPS7BQ9H9Q2 264 aaPredicted RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 LIN28AQ9H9Z2 209 aaKnown RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 RNF11Q9Y3C5 154 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 TSC22D4Q9Y3Q8 395 aa11.21□□□□□ -0.61
DDX54-206ENST00000549271 TNPO3Q9Y5L0 923 aaKnown RBP11.21□□□□□ -0.61
DDX54-206ENST00000549271 NCKAP5O14513 1909 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 A0A0G2JMM0 328 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 EXOC1LA0A1B0GW35 172 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 A0A1W2PPB8 328 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 A0A1W2PRS3 328 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 KIR3DP1A8MWS1 328 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 C17orf105B2RV13 164 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 WWP2O00308 870 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 OR7A17O14581 309 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 DVL2O14641 736 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 ZNF354AO60765 605 aaPredicted RBP11.2□□□□□ -0.62
DDX54-206ENST00000549271 SMPD2O60906 423 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 BMP5P22003 454 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 PIK3CBP42338 1070 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 MAGEA5P43359 124 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 IGLV3-21P80748 117 aaPredicted RBP11.2□□□□□ -0.62
DDX54-206ENST00000549271 BIKQ13323 160 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 SLC29A2Q14542 456 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 TSNAXIP1Q2TAA8 658 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 ZNF750Q32MQ0 723 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 TMEM35AQ53FP2 167 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 PIGGQ5H8A4 983 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 WLSQ5T9L3 541 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
DDX54-206ENST00000549271 HMBOX1Q6NT76 420 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 YTHDF3Q7Z739 585 aaKnown RBP11.2□□□□□ -0.62
DDX54-206ENST00000549271 TMEM251Q8N6I4 163 aa11.2□□□□□ -0.62
DDX54-206ENST00000549271 ACOT4Q8N9L9 421 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms