RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 KCNA10Q16322 511 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 CD200R1LQ6Q8B3 271 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 SLC7A13Q8TCU3 470 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 ATF6BQ99941 703 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 FGF20Q9NP95 211 aaPredicted RBP21.92■■□□□ 1.1
NPAS3-206ENST00000548645 TRDV1A0A1B0GX56 115 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 PRR23AA6NEV1 266 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 CYBAP13498 195 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 OPRD1P41143 372 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 BDKRB1P46663 353 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 TOR2AQ5JU69 321 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 ZNF57Q68EA5 555 aaPredicted RBP21.92■■□□□ 1.1
NPAS3-206ENST00000548645 TMEM159Q96B96 161 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 NARFLQ9H6Q4 476 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 A4GALTQ9NPC4 353 aa21.92■■□□□ 1.1
NPAS3-206ENST00000548645 MRPS18AQ9NVS2 196 aaKnown RBP21.92■■□□□ 1.1
NPAS3-206ENST00000548645 MRPL39Q9NYK5 338 aaKnown RBP21.92■■□□□ 1.1
NPAS3-206ENST00000548645 SNTNA6NMZ2 147 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 LRRTM2O43300 516 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 TSC22D2O75157 780 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 TGFB1P01137 390 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 ACP2P11117 423 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 GIPRP48546 466 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 NDUFA9Q16795 377 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 CDONQ4KMG0 1287 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 TMEM19Q96HH6 336 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.91■■□□□ 1.1
NPAS3-206ENST00000548645 OR51B5Q9H339 312 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 FOLH1BQ9HBA9 442 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 DMRT3Q9NQL9 472 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 ASB4Q9Y574 426 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 OR2AG2A6NM03 316 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 CACNB4O00305 520 aaPredicted RBP21.91■■□□□ 1.1
NPAS3-206ENST00000548645 PRSS53Q2L4Q9 553 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 KIAA1211LQ6NV74 962 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 FOXJ1Q92949 421 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 ZNF354BQ96LW1 612 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 CXorf36Q9H7Y0 433 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 MIEF1Q9NQG6 463 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 TAS2R7Q9NYW3 318 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 NUP50Q9UKX7 468 aa21.91■■□□□ 1.1
NPAS3-206ENST00000548645 EXOSC1Q9Y3B2 195 aaKnown RBP21.91■■□□□ 1.1
NPAS3-206ENST00000548645 UBL4AP11441 157 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 OR1D2P34982 312 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 GAS1P54826 345 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 SNAPC1Q16533 368 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 TNFAIP8L2Q6P589 184 aaPredicted RBP21.9■■□□□ 1.1
NPAS3-206ENST00000548645 RBM45Q8IUH3 476 aaKnown RBP21.9■■□□□ 1.1
NPAS3-206ENST00000548645 HORMAD2Q8N7B1 307 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 OMA1Q96E52 524 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 RNFT2Q96EX2 444 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 SLC6A16Q9GZN6 736 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 NT5DC2Q9H857 520 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 ACAD8Q9UKU7 415 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 ING4Q9UNL4 249 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 DNMT3AQ9Y6K1 912 aaPredicted RBP21.9■■□□□ 1.1
NPAS3-206ENST00000548645 TMEM202A6NGA9 273 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 SH3BP5O60239 455 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 KLK1P06870 262 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 RPL17P18621 184 aaKnown RBP21.9■■□□□ 1.1
NPAS3-206ENST00000548645 AVPR1BP47901 424 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 BTG1P62324 171 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 SLBPQ14493 270 aaKnown RBP eCLIP21.9■■□□□ 1.1
NPAS3-206ENST00000548645 IER5LQ5T953 404 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 ANKRD54Q6NXT1 300 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 CD300LDQ6UXZ3 194 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 GHDCQ8N2G8 530 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 FUZQ9BT04 418 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 GLTPQ9NZD2 209 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 EIF3KQ9UBQ5 218 aaKnown RBP21.9■■□□□ 1.1
NPAS3-206ENST00000548645 B4GALT6Q9UBX8 382 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 LINC00862A6NCI5 91 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 PLOD3O60568 738 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 ADAMTS4O75173 837 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 SOD1P00441 154 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 CKBP12277 381 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 ADAM15Q13444 863 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 SDE2Q6IQ49 451 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 ACSM5Q6NUN0 579 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 FAM20CQ8IXL6 584 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 WACQ9BTA9 647 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 EFCAB11Q9BUY7 163 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 SLC28A3Q9HAS3 691 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 HCSTQ9UBK5 93 aa21.9■■□□□ 1.1
NPAS3-206ENST00000548645 PCM1Q15154 2024 aa21.89■■□□□ 1.1
NPAS3-206ENST00000548645 PRODHO43272 600 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 SLC22A5O76082 557 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 APOL3O95236 402 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 IL3P08700 152 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 POU3F3P20264 500 aaPredicted RBP21.89■■□□□ 1.09
NPAS3-206ENST00000548645 CFL1P23528 166 aaKnown RBP21.89■■□□□ 1.09
NPAS3-206ENST00000548645 RPS26P62854 115 aaKnown RBP21.89■■□□□ 1.09
NPAS3-206ENST00000548645 SLC8B1Q6J4K2 584 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 TRILQ7L0X0 811 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 ANKK1Q8NFD2 765 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 VOPP1Q96AW1 172 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 NEURL3Q96EH8 262 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 ARPC5LQ9BPX5 153 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 ARHGAP9Q9BRR9 750 aa21.89■■□□□ 1.09
NPAS3-206ENST00000548645 PIGUQ9H490 435 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms