RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CNRIP1Q96F85 164 aaPredicted RBP17.51■□□□□ 0.39
PRPF40B-208ENST00000548436 YIPF4Q9BSR8 244 aa17.51■□□□□ 0.39
PRPF40B-208ENST00000548436 AKIP1Q9NQ31 210 aa17.51■□□□□ 0.39
PRPF40B-208ENST00000548436 FAIMQ9NVQ4 179 aa17.51■□□□□ 0.39
PRPF40B-208ENST00000548436 RHBDL2Q9NX52 303 aa17.51■□□□□ 0.39
PRPF40B-208ENST00000548436 FBXW2Q9UKT8 454 aa17.51■□□□□ 0.39
PRPF40B-208ENST00000548436 TMCC3Q9ULS5 477 aa17.51■□□□□ 0.39
PRPF40B-208ENST00000548436 PRSS38A1L453 326 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 CLDN25C9JDP6 229 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 AIFM1O95831 613 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 H1F0P07305 194 aaKnown RBP17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 IGFBP1P08833 259 aaPredicted RBP17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 CERS1P27544 350 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 NTSP30990 170 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 CLDN2P57739 230 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 DGUOKQ16854 277 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 DCST1Q5T197 706 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 CCDC116Q8IYX3 515 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 STX19Q8N4C7 294 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 TMCO5AQ8N6Q1 288 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 B3GNT7Q8NFL0 401 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 RASSF5Q8WWW0 418 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 SARGQ9BW04 601 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 SEMA3GQ9NS98 782 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 ZSCAN32Q9NX65 697 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 TBC1D29Q9UFV1 150 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 APOBEC3BQ9UH17 382 aaKnown RBP17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 ACAD8Q9UKU7 415 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 PCDHGA4Q9Y5G9 962 aa17.5■□□□□ 0.39
PRPF40B-208ENST00000548436 TMEM247A6NEH6 219 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 EFCAB9A8MZ26 197 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 SERPINB7O75635 380 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ADAP00813 363 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 PTHP01270 115 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ADRA2AP08913 450 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 C8orf89P0DMQ9 161 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ADORA3P0DMS8 318 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ZNF12P17014 697 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 RANBP1P43487 201 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 RAB8AP61006 207 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 FUT5Q11128 374 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 HMGN2P46Q86SG4 172 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 TBC1D19Q8N5T2 526 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ZNF675Q8TD23 568 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 UCK2Q9BZX2 261 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 KIR3DX1Q9H7L2 352 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 CES1P1Q9UKY3 287 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 A4GNTQ9UNA3 340 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ISM1B1AKI9 464 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 M0R3H8 397 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 OR10H3O60404 316 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 OSMP13725 252 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 CMPK1P30085 196 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ITGADQ13349 1161 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 PIN1Q13526 163 aaPredicted RBP17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 IRF3Q14653 427 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ZNF846Q147U1 533 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ZNF425Q6IV72 752 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 DCDC5Q6ZRR9 648 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 PTCHD4Q6ZW05 846 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 OR4E2Q8NGC2 313 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 OR2M4Q96R27 311 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 FUZQ9BT04 418 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 SLIRPQ9GZT3 109 aaKnown RBP17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 CD93Q9NPY3 652 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 TAS2R16Q9NYV7 291 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 ERGIC3Q9Y282 383 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 B3GNT3Q9Y2A9 372 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 CA5BQ9Y2D0 317 aa17.49■□□□□ 0.39
PRPF40B-208ENST00000548436 FAAHO00519 579 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 SULT1C4O75897 302 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 SOX14O95416 240 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 EPPINO95925 133 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 EGFP01133 1207 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 HMGN2P05204 90 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 CHRM4P08173 479 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 HOXB2P14652 356 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 GADD45AP24522 165 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 AK4P27144 223 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 FEN1P39748 380 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 KHKP50053 298 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 CRISP3P54108 245 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 LASP1Q14847 261 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 SDE2Q6IQ49 451 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 TMEM64Q6YI46 380 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 ADCK1Q86TW2 530 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 MFSD9Q8NBP5 474 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 SLC7A13Q8TCU3 470 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 OR1E3Q8WZA6 343 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 MRPL38Q96DV4 380 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 ARMC7Q9H6L4 198 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 ZBTB20Q9HC78 741 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 HMG20AQ9NP66 347 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 C11orf16Q9NQ32 467 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 OSGIN1Q9UJX0 560 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 MGAT4BQ9UQ53 548 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 FANCMQ8IYD8 2048 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 H0Y8X5 98 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 NARSO43776 548 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 AIREO43918 545 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms