RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 RAPH1Q70E73 1250 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 IGDCC3Q8IVU1 814 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 LRRC8AQ8IWT6 810 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 LAS2Q8IYD9 372 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 ZCCHC7Q8N3Z6 543 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PDPRQ8NCN5 879 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 LRRN4CLQ8ND94 238 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 WFDC11Q8NEX6 87 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 OR1J4Q8NGS1 313 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 LINC01560Q8TB33 94 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 STAG3L4Q8TBR4 150 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 ZPLD1Q8TCW7 415 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 ZNF473Q8WTR7 871 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 ANKRD49Q8WVL7 239 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 SMPDL3BQ92485 455 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PPWD1Q96BP3 646 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 TMEM41AQ96HV5 264 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 RILPQ96NA2 401 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 TMEM79Q9BSE2 394 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 BDH2Q9BUT1 245 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 CD244Q9BZW8 370 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 EPB41L4BQ9H329 900 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PIGMQ9H3S5 423 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 METTL7AQ9H8H3 244 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 TEX10Q9NXF1 929 aaPredicted RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 NUDT4Q9NZJ9 180 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 CNOT11Q9UKZ1 510 aaKnown RBP8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 CFL2Q9Y281 166 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 C15orf41Q9Y2V0 281 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 PCDHGA11Q9Y5H2 935 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 NPFFR2Q9Y5X5 522 aa8.36□□□□□ -1.07
AC055716.3-201ENST00000547533 SH3D21A4FU49 640 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 MBD3L4A6NDZ8 208 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 MBD3L3A6NE82 208 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 MBD3L5A6NJ08 208 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SUPT3HB4E1H0 165 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 H0Y3Z8 333 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 K7EPI3 171 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SAP18O00422 153 aaKnown RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 TAPBPO15533 448 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 ZNF354AO60765 605 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SH3BGRLO75368 114 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 TRIM3O75382 744 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SUPT3HO75486 399 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 LRATO95237 230 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 ACSL3O95573 720 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SLC35E2BP0CK96 405 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SLC35E2P0CK97 266 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 TCP1P17987 556 aaKnown RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 CHMP24386 653 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 HOXC12P31275 282 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 RPS13P62277 151 aaKnown RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 EBPQ15125 230 aaKnown RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 KBTBD12Q3ZCT8 623 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 DEPDC1Q5TB30 811 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 VASNQ6EMK4 673 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 OR52E8Q6IFG1 317 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 GRHL2Q6ISB3 625 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 ZNF793Q6ZN11 406 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 CAPN12Q6ZSI9 719 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SEM1Q6ZVN7 128 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 Q71RC1 249 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 CHMP1BQ7LBR1 199 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 TBC1D1Q86TI0 1168 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 GALNT12Q8IXK2 581 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 ZBED8Q8IZ13 594 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 LRRC75A-AS1Q8N1F1 130 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 NAXEQ8NCW5 288 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SIMC1Q8NDZ2 872 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 FBXO36Q8NEA4 188 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 OR7G3Q8NG95 312 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 OR7G1Q8NGA0 311 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 MBD3L2Q8NHZ7 208 aaPredicted RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 SPPL2AQ8TCT8 520 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 PYROXD1Q8WU10 500 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 CPNE1Q99829 537 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 ANGPTL4Q9BY76 406 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 DDX47Q9H0S4 455 aaKnown RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 OR51B5Q9H339 312 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 PLEKHF2Q9H8W4 249 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 NMRAL1Q9HBL8 299 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 ZNF226Q9NYT6 803 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 PTBP2Q9UKA9 531 aaKnown RBP8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 PSAT1Q9Y617 370 aa8.35□□□□□ -1.07
AC055716.3-201ENST00000547533 ZSCAN12O43309 604 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 GUCY1B2O75343 617 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 RHOXF2BP0C7M4 288 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 CD1DP15813 335 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 BMP7P18075 431 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 SPRP35270 261 aaPredicted RBP8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 CPOXP36551 454 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 ARL1P40616 181 aaPredicted RBP8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 PIK3CGP48736 1102 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 SLC37A1P57057 533 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 FBXW4P57775 412 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 RAB10P61026 200 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 POU4F3Q15319 338 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 Q5PR19 223 aa8.34□□□□□ -1.07
AC055716.3-201ENST00000547533 LIPJQ5W064 366 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms