RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 OR9A2Q8NGT5 310 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 OR2Y1Q8NGV0 311 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 RIT1Q92963 219 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 VPS50Q96JG6 964 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 ART5Q96L15 291 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 ANKRD27Q96NW4 1050 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 MMADHCQ9H3L0 296 aaPredicted RBP14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 SOX17Q9H6I2 414 aaPredicted RBP14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 AKIRIN1Q9H9L7 192 aaPredicted RBP14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 SPAG4Q9NPE6 437 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 ADAP2Q9NPF8 381 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 ASCL3Q9NQ33 180 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 NECTIN3Q9NQS3 549 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 KCND3Q9UK17 655 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 L3MBTL1Q9Y468 752 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 SNX8Q9Y5X2 465 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 GMEB1Q9Y692 573 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 AK5Q9Y6K8 562 aa14.83□□□□□ -0.04
TRAFD1-203ENST00000547063 TRBV5-3A0A0A0MS03 114 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 FXYD1O00168 92 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 EMC8O43402 210 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 BRINP1O60477 761 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 PLOD3O60568 738 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 RECKO95980 971 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 TNNI3P19429 210 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 PTPN6P29350 595 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CHI3L1P36222 383 aaPredicted RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CDKN2CP42773 168 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 ANXA11P50995 505 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 NCALDP61601 193 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 TXNL4AP83876 142 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 VAC14Q08AM6 782 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 MAP4K2Q12851 820 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 FOXC1Q12948 553 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CAMK2BQ13554 666 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 RUNDC3AQ59EK9 446 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 NANOGP8Q6NSW7 305 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 LAPTM4BQ86VI4 370 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 MARCH9Q86YJ5 346 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 SHISA5Q8N114 240 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 ENDOVQ8N8Q3 282 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CT55Q8WUE5 264 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 DAZLQ92904 295 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 MCUR1Q96AQ8 359 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 NACC2Q96BF6 587 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 ELP4Q96EB1 424 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 GPATCH1Q9BRR8 931 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 SLC35A5Q9BS91 424 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CXorf36Q9H7Y0 433 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 NANOGQ9H9S0 305 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CXorf21Q9HAI6 301 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 TPT1P8Q9HAU6 139 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 SIRT3Q9NTG7 399 aaPredicted RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 VAPAQ9P0L0 249 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 SLAMF8Q9P0V8 285 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 PRPF19Q9UMS4 504 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 FARSAQ9Y285 508 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 PTRH2Q9Y3E5 179 aaKnown RBP14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CLDN16Q9Y5I7 305 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 CLCA3PQ9Y6N3 262 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 SDK2Q58EX2 2172 aa14.82□□□□□ -0.04
TRAFD1-203ENST00000547063 RNF103-CHMP3A0A140T963 221 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 TGFBR3LH3BV60 316 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 CLIC1O00299 241 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 DNAJA2O60884 412 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 KLF7O75840 302 aaPredicted RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 DNAJC8O75937 253 aaPredicted RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 GSNP06396 782 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 HOXB9P17482 250 aaPredicted RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 SLC6A2P23975 617 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 CDK9P50750 372 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 OR4D2P58180 307 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 DUSP2Q05923 314 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 DNASE1L3Q13609 305 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 CAPRIN1Q14444 709 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 SPRED3Q2MJR0 410 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 PRICKLE4Q2TBC4 344 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 ZNF628Q5EBL2 1059 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 C8orf82Q6P1X6 216 aaPredicted RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 TMEM107Q6UX40 140 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 BNC2Q6ZN30 1099 aaPredicted RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 SHISA6Q6ZSJ9 500 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 TMEM151BQ8IW70 566 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 VWA5B2Q8N398 1253 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 IL22RA1Q8N6P7 574 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 OR14A16Q8NHC5 309 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 FBXO27Q8NI29 283 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 ZFP90Q8TF47 636 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 TSLPQ969D9 159 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 KIAA1143Q96AT1 154 aaPredicted RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 CTHRC1Q96CG8 243 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 NEURL3Q96EH8 262 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 EFHD1Q9BUP0 239 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 THUMPD3Q9BV44 507 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 PNO1Q9NRX1 252 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 ZCCHC3Q9NUD5 404 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 DDX18Q9NVP1 670 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 SLC25A37Q9NYZ2 338 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 MAT2BQ9NZL9 334 aa14.81□□□□□ -0.04
TRAFD1-203ENST00000547063 NTMQ9P121 344 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms