RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CGREF1Q99674 301 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 GPATCH1Q9BRR8 931 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 SPATA9Q9BWV2 254 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 PAIP1Q9H074 479 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 MMADHCQ9H3L0 296 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 CXorf21Q9HAI6 301 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 SLAMF7Q9NQ25 335 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 MAP10Q9P2G4 905 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 CROTQ9UKG9 612 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 TCFL5Q9UL49 500 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 PRPF19Q9UMS4 504 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 PPIEQ9UNP9 301 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 EVPLLA8MZ36 301 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 B2RBV5 119 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 C9JVG2 144 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 AIM2O14862 343 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 EMC8O43402 210 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 CDC123O75794 336 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 ABCB1P08183 1280 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 MMP11P24347 488 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 FEN1P39748 380 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 MXRA7P84157 204 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 FOXC1Q12948 553 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 SSPNQ14714 243 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 PRICKLE4Q2TBC4 344 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 CRTC2Q53ET0 693 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 PAGE3Q5JUK9 113 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 CCDC116Q8IYX3 515 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 OR2L13Q8N349 312 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 VWA5B2Q8N398 1253 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 ENDOVQ8N8Q3 282 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 MORN4Q8NDC4 146 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 RIT1Q92963 219 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 NKD1Q969G9 470 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 ELP4Q96EB1 424 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 NEURL3Q96EH8 262 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 FBXL20Q96IG2 436 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 ANKRD27Q96NW4 1050 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 BTBD10Q9BSF8 475 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 RBCK1Q9BYM8 510 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 LRMDAQ9H2I8 198 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 SPAG4Q9NPE6 437 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 NECTIN3Q9NQS3 549 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 PTRH2Q9Y3E5 179 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 AK5Q9Y6K8 562 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 TRABD2BA6NFA1 517 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 FXYD1O00168 92 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 CNOT3O75175 753 aaKnown RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 JRKO75564 520 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 MAOAP21397 527 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 BTG2P78543 158 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 FUT7Q11130 342 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 HSPB3Q12988 150 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 PRSS53Q2L4Q9 553 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 RIPOR1Q6ZS17 1223 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 ANKRD46Q86W74 232 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 RAB43Q86YS6 212 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 CLECL1Q8IZS7 167 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 IL22RA1Q8N6P7 574 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 MS4A4EQ96PG1 132 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 LPAR4Q99677 370 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 NPAS2Q99743 824 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 SIRT3Q9NTG7 399 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 GIN1Q9NXP7 522 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 MAT2BQ9NZL9 334 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 ABCD2Q9UBJ2 740 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 ZNF639Q9UID6 485 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 C19orf53Q9UNZ5 99 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 CLCA3PQ9Y6N3 262 aa14.98□□□□□ -0.01
PRPF40A-212ENST00000545856 RNF103-CHMP3A0A140T963 221 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 SAGE2PA6NJ88 616 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 OR6C76A6NM76 312 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 ASNA1O43681 348 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 PRAMEF2O60811 474 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 PSMG1O95456 288 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 CPSF4O95639 269 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 AGR2O95994 175 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 IFNA16P05015 189 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 NT5EP21589 574 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 CPOXP36551 454 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 DLSTP36957 453 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 CCT3P49368 545 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 RUNDC3AQ59EK9 446 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 LCN10Q6JVE6 187 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 ZNF621Q6ZSS3 439 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 ZNF551Q7Z340 670 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 ANKRD37Q7Z713 158 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 OR4N5Q8IXE1 308 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 RBM15BQ8NDT2 890 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 OR9A2Q8NGT5 310 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 MIPOL1Q8TD10 442 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 ZFP90Q8TF47 636 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 UCN3Q969E3 161 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 SLC45A3Q96JT2 553 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 SCNM1Q9BWG6 230 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 SOX17Q9H6I2 414 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 TPT1P8Q9HAU6 139 aa14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 DDX18Q9NVP1 670 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-212ENST00000545856 TAS2R1Q9NYW7 299 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms