RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 C17orf53Q8N3J3 647 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 TBC1D19Q8N5T2 526 aa13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 TRPV3Q8NET8 790 aa13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 OR10H5Q8NGA6 315 aa13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 SLC35B2Q8TB61 432 aa13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 PPWD1Q96BP3 646 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 CTHRC1Q96CG8 243 aa13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 MFSD3Q96ES6 412 aa13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 NPLQ9BXD5 320 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 FETUBQ9UGM5 382 aa13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 MRPS33Q9Y291 106 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-216ENST00000545663 C2orf72A6NCS6 295 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 ERI2A8K979 691 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 CCDC188H7C350 402 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 EIF3FO00303 357 aaPredicted RBP13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 ERI3O43414 337 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 TCF21O43680 179 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 LIASO43766 372 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 SNX4O95219 450 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 CCND1P24385 295 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 SLC6A12P48065 614 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 REEP5Q00765 189 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 CKAP4Q07065 602 aaKnown RBP13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 CTBP1Q13363 440 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 TBCELQ5QJ74 424 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 TIGD3Q6B0B8 471 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 ALKBH2Q6NS38 261 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 MILR1Q7Z6M3 343 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 OR4N5Q8IXE1 308 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 CAVIN3Q969G5 261 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 MS4A6EQ96DS6 147 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 TCF12Q99081 682 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 GPR21Q99679 349 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 DHRS7Q9Y394 339 aa13.89□□□□□ -0.19
CLSTN3-216ENST00000545663 E7EVH7 732 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 B3GALT2O43825 422 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 CD8AP01732 235 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 ENO3P13929 434 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 PAMP19021 973 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 PTNP21246 168 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 CERS1P27544 350 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 GMPRP36959 345 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 CASP3P42574 277 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 FNTAP49354 379 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 PLA2G16P53816 162 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 CYP1B1Q16678 543 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 KLHDC8AQ8IYD2 350 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 DND1Q8IYX4 353 aaKnown RBP13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 RDH11Q8TC12 318 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 SPPL2AQ8TCT8 520 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 SLC5A11Q8WWX8 675 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 ZNF845Q96IR2 970 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 NTMT1Q9BV86 223 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 MANSC1Q9H8J5 431 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 PARVBQ9HBI1 364 aa13.88□□□□□ -0.19
CLSTN3-216ENST00000545663 CLOCKO15516 846 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 CRHP06850 196 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 ETS1P14921 441 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 CHMP24386 653 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 LHX2P50458 406 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 FUT7Q11130 342 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 SQLEQ14534 574 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 OASLQ15646 514 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 PGGHGQ32M88 737 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 KBTBD12Q3ZCT8 623 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 UGT3A1Q6NUS8 523 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 ADAM5Q6NVV9 412 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 ANGPTL8Q6UXH0 198 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 P4HA3Q7Z4N8 544 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 CREG2Q8IUH2 290 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 CILP2Q8IUL8 1156 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 C3orf56Q8N813 242 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 CCDC89Q8N998 374 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 OR56A3Q8NH54 315 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 EEF1AKMT1Q8WVE0 214 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 HTRA1Q92743 480 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 FBXW5Q969U6 566 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 GAL3ST3Q96A11 431 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 MAGOHBQ96A72 148 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 REPS1Q96D71 796 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 ZMYND19Q96E35 227 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 PHACTR1Q9C0D0 580 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 WWTR1Q9GZV5 400 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 EML4Q9HC35 981 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 SERHLQ9NQF3 203 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 WWOXQ9NZC7 414 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 KLHL42Q9P2K6 505 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 DAPP1Q9UN19 280 aa13.87□□□□□ -0.19
CLSTN3-216ENST00000545663 KMT2CQ8NEZ4 4911 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 TCRBV7S2A1N4TA0A589 114 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 LRIT2A6NDA9 550 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 TP53I11O14683 189 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 APRTP07741 180 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 CLDN18P56856 261 aa13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 STXBP1P61764 594 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-216ENST00000545663 DHX9Q08211 1270 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms