RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 SLC38A2Q96QD8 506 aa17.34■□□□□ 0.37
CCT4-204ENST00000544079 TEFMQ96QE5 360 aaKnown RBP17.34■□□□□ 0.37
CCT4-204ENST00000544079 C1GALT1Q9NS00 363 aa17.34■□□□□ 0.37
CCT4-204ENST00000544079 FNDC3AQ9Y2H6 1198 aaKnown RBP17.34■□□□□ 0.37
CCT4-204ENST00000544079 OTOFQ9HC10 1997 aa17.34■□□□□ 0.37
CCT4-204ENST00000544079 SLC22A23A1A5C7 686 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 CACNB4O00305 520 aaPredicted RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 SLC28A2O43868 658 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 IGLV3-27P01718 113 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 HMGN1P05114 100 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 SMIM10L2AP0DMW4 78 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 SMIM10L2BP0DMW5 78 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 ACP2P11117 423 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 HSD3B1P14060 373 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 ELK1P19419 428 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 HSD3B2P26439 372 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 LCN1P31025 176 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 FEN1P39748 380 aaKnown RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 ZNF169Q14929 603 aaPredicted RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 SEC23BQ15437 767 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 CCDC85BQ15834 202 aaPredicted RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 TRIM40Q6P9F5 258 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 MBOAT1Q6ZNC8 495 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 CHMP1BQ7LBR1 199 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 ADAMTS19Q8TE59 1207 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 PCNPQ8WW12 178 aaKnown RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 DNAJB3Q8WWF6 145 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 KCTD12Q96CX2 325 aaKnown RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 C7orf50Q9BRJ6 194 aaKnown RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 H2AFJQ9BTM1 129 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 BHLHE41Q9C0J9 482 aaPredicted RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 ACTR6Q9GZN1 396 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 RNF32Q9H0A6 362 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 FBXO44Q9H4M3 255 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 RERGLQ9H628 205 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 SPATA6Q9NWH7 488 aaPredicted RBP17.33■□□□□ 0.37
CCT4-204ENST00000544079 ASB6Q9NWX5 421 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 ARL15Q9NXU5 204 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 HCN3Q9P1Z3 774 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 ANGPT4Q9Y264 503 aa17.33■□□□□ 0.37
CCT4-204ENST00000544079 H3BN98 237 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 M0QZQ0 153 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 KDELR3O43731 214 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 MMP20O60882 483 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 SRPRAP08240 638 aaKnown RBP17.33■□□□□ 0.36
CCT4-204ENST00000544079 IDSP22304 550 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 ADCYAP1R1P41586 468 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 ACSM1Q08AH1 577 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
CCT4-204ENST00000544079 TTC16Q8NEE8 873 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 WDR48Q8TAF3 677 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 NEIL3Q8TAT5 605 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 FGF11Q92914 225 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 ZNF582Q96NG8 517 aaPredicted RBP17.33■□□□□ 0.36
CCT4-204ENST00000544079 POLR2J3Q9H1A7 115 aaKnown RBP17.33■□□□□ 0.36
CCT4-204ENST00000544079 MCCC2Q9HCC0 563 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 ENAMQ9NRM1 1142 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 SEMA3GQ9NS98 782 aa17.33■□□□□ 0.36
CCT4-204ENST00000544079 TRAV6A0A075B6T7 132 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 TRBV4-1A0A0J9YWV2 114 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 ZNF98A6NK75 572 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 INPPL1O15357 1258 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 TSPAN3O60637 253 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 RECKO95980 971 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 AOAHP28039 575 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 CCND3P30281 292 aaPredicted RBP17.32■□□□□ 0.36
CCT4-204ENST00000544079 EFNB1P98172 346 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 ACSM2AQ08AH3 577 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 OPCMLQ14982 345 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 COX20Q5RI15 118 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 LIPJQ5W064 366 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 ACSM2BQ68CK6 577 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 LRFN4Q6PJG9 635 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 CD300LDQ6UXZ3 194 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 TMEM91Q6ZNR0 172 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 MIB1Q86YT6 1006 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 CMIPQ8IY22 773 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 ZNF485Q8NCK3 441 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 OR4K3Q96R72 315 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 SLC39A1Q9NY26 324 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 TRBV5-4A0A0C4DH59 114 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 ARAFP10398 606 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 CHI3L1P36222 383 aaPredicted RBP17.32■□□□□ 0.36
CCT4-204ENST00000544079 HOXA1P49639 335 aaPredicted RBP17.32■□□□□ 0.36
CCT4-204ENST00000544079 TAP2Q03519 686 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 RING1Q06587 406 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 EFEMP1Q12805 493 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 COX10Q12887 443 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 GSG1Q2KHT4 349 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 DCST1Q5T197 706 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 WASH2PQ6VEQ5 465 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 C3P1Q6ZMU1 363 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 WDR53Q7Z5U6 358 aaPredicted RBP17.32■□□□□ 0.36
CCT4-204ENST00000544079 MARCH9Q86YJ5 346 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 EIF4E3Q8N5X7 224 aaKnown RBP17.32■□□□□ 0.36
CCT4-204ENST00000544079 LINC00469Q8N7U9 141 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 DBF4BQ8NFT6 615 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 APOBEC4Q8WW27 367 aaKnown RBP17.32■□□□□ 0.36
CCT4-204ENST00000544079 SCRN2Q96FV2 425 aa17.32■□□□□ 0.36
CCT4-204ENST00000544079 HIST1H2AHQ96KK5 128 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms