RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TCP11X1B4DZS4 312 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 DYRK3O43781 588 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 TBX19O60806 448 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 ALDOCP09972 364 aaKnown RBP14.03□□□□□ -0.16
CD9-210ENST00000543916 LBPP18428 481 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 S1PR1P21453 382 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 SSTR4P31391 388 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 ST13P50502 369 aaKnown RBP14.03□□□□□ -0.16
CD9-210ENST00000543916 MPEG1Q2M385 716 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 ACER2Q5QJU3 275 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 OGFOD2Q6N063 350 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 FAM111BQ6SJ93 734 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 IGFL3Q6UXB1 125 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 HSDL2Q6YN16 418 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 PTRH1Q86Y79 214 aaKnown RBP14.03□□□□□ -0.16
CD9-210ENST00000543916 C9orf40Q8IXQ3 194 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 SLC5A8Q8N695 610 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 KRTCAP2Q8N6L1 136 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 THAP3Q8WTV1 239 aaPredicted RBP14.03□□□□□ -0.16
CD9-210ENST00000543916 ZNF764Q96H86 408 aaPredicted RBP14.03□□□□□ -0.16
CD9-210ENST00000543916 ART5Q96L15 291 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 ZNF354BQ96LW1 612 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 LMF1Q96S06 567 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 CDCP1Q9H5V8 836 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 LIN28AQ9H9Z2 209 aaKnown RBP14.03□□□□□ -0.16
CD9-210ENST00000543916 SLAMF7Q9NQ25 335 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 GIMAP4Q9NUV9 329 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 COPS7AQ9UBW8 275 aa14.03□□□□□ -0.16
CD9-210ENST00000543916 BSNQ9UPA5 3926 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 GABRR3A8MPY1 467 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 SCAMP2O15127 329 aaKnown RBP14.02□□□□□ -0.17
CD9-210ENST00000543916 EDF1O60869 148 aaKnown RBP14.02□□□□□ -0.17
CD9-210ENST00000543916 C1QL1O75973 258 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 ZFAND5O76080 213 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 F10P00742 488 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 HPCAL1P37235 193 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 SLC37A1P57057 533 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 MLF1P58340 268 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 RNF4P78317 190 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 GUCY1A3Q02108 690 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 FUT7Q11130 342 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 MAP4K2Q12851 820 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 NFATC3Q12968 1075 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 MEP1AQ16819 746 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 ZNF628Q5EBL2 1059 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 COLEC12Q5KU26 742 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 C6orf163Q5TEZ5 329 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 ABHD17BQ5VST6 288 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 EPGNQ6UW88 154 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 RNF111Q6ZNA4 994 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 C16orf47Q6ZP98 133 aaPredicted RBP14.02□□□□□ -0.17
CD9-210ENST00000543916 RPS19BP1Q86WX3 136 aaKnown RBP14.02□□□□□ -0.17
CD9-210ENST00000543916 RIMKLAQ8IXN7 391 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 SAMD14Q8IZD0 417 aaPredicted RBP14.02□□□□□ -0.17
CD9-210ENST00000543916 BEST3Q8N1M1 668 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 ARMC10Q8N2F6 343 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 VWA5B2Q8N398 1253 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 RBMXL3Q8N7X1 1067 aaKnown RBP14.02□□□□□ -0.17
CD9-210ENST00000543916 SIMC1Q8NDZ2 872 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 OR9A2Q8NGT5 310 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 CIDECQ96AQ7 238 aaPredicted RBP14.02□□□□□ -0.17
CD9-210ENST00000543916 PPCDCQ96CD2 204 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 CTHRC1Q96CG8 243 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 MTERF3Q96E29 417 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 OR52B2Q96RD2 323 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 BBS4Q96RK4 519 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 MFRPQ9BY79 579 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 BRINP2Q9C0B6 783 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 GLIPR2Q9H4G4 154 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 EPS8L2Q9H6S3 715 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 PLA2G3Q9NZ20 509 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 STMN3Q9NZ72 180 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 ATP6V1HQ9UI12 483 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 ZNF639Q9UID6 485 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 TEKT2Q9UIF3 430 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 ATRXP46100 2492 aa14.02□□□□□ -0.17
CD9-210ENST00000543916 PDPK1O15530 556 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 DPM1O60762 260 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 DIAPH2O60879 1101 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 WDPCPO95876 746 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 CBX7O95931 251 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 PCSK2P16519 638 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 NTSP30990 170 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 NCBP2P52298 156 aaKnown RBP eCLIP14.01□□□□□ -0.17
CD9-210ENST00000543916 CLDN8P56748 225 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 MRPS35P82673 323 aaKnown RBP14.01□□□□□ -0.17
CD9-210ENST00000543916 DUSP8Q13202 625 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 EXOSC7Q15024 291 aaKnown RBP14.01□□□□□ -0.17
CD9-210ENST00000543916 NADK2Q4G0N4 442 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 TRMT12Q53H54 448 aaKnown RBP14.01□□□□□ -0.17
CD9-210ENST00000543916 TMEM198Q66K66 360 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 NXNQ6DKJ4 435 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 R3HCC1LQ7Z5L2 792 aaKnown RBP14.01□□□□□ -0.17
CD9-210ENST00000543916 SPATA19Q7Z5L4 167 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 HPS6Q86YV9 775 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 FAM9CQ8IZT9 166 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 LGI4Q8N135 537 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 ZADH2Q8N4Q0 377 aa14.01□□□□□ -0.17
CD9-210ENST00000543916 ZNF615Q8N8J6 731 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms