RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SMPDL3AQ92484 453 aa13.01□□□□□ -0.33
VPS33A-208ENST00000543633 ZNF514Q96K75 400 aaPredicted RBP13.01□□□□□ -0.33
VPS33A-208ENST00000543633 TMEM246Q9BRR3 403 aa13.01□□□□□ -0.33
VPS33A-208ENST00000543633 PITHD1Q9GZP4 211 aaPredicted RBP13.01□□□□□ -0.33
VPS33A-208ENST00000543633 MARCH7Q9H992 704 aa13.01□□□□□ -0.33
VPS33A-208ENST00000543633 ACSS1Q9NUB1 689 aaPredicted RBP13.01□□□□□ -0.33
VPS33A-208ENST00000543633 P2RX2Q9UBL9 471 aa13.01□□□□□ -0.33
VPS33A-208ENST00000543633 GSTK1Q9Y2Q3 226 aa13.01□□□□□ -0.33
VPS33A-208ENST00000543633 MAU2Q9Y6X3 613 aa13.01□□□□□ -0.33
VPS33A-208ENST00000543633 CCDC88CQ9P219 2028 aa13.01□□□□□ -0.33
VPS33A-208ENST00000543633 SAP18O00422 153 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 SLC30A4O14863 429 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 TMCC2O75069 709 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SEMA7AO75326 666 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 TSPAN19P0C672 248 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 MSL3P1P0C860 447 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ACP2P11117 423 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 LAG3P18627 525 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 CPN2P22792 545 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 AZGP1P25311 298 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 PBLDP30039 288 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 SDC2P34741 201 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 SMSP52788 366 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 UBE3AQ05086 875 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 TARDBPQ13148 414 aaKnown RBP eCLIP13□□□□□ -0.33
VPS33A-208ENST00000543633 QPRTQ15274 297 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ZNF628Q5EBL2 1059 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 CD200R1LQ6Q8B3 271 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ZNF730Q6ZMV8 503 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 MRGPREQ86SM8 312 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ADIPOR2Q86V24 386 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ZBED6CLQ96FA7 236 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 DTD2Q96FN9 168 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 DIRAS2Q96HU8 199 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ZNF582Q96NG8 517 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 GON7Q9BXV9 100 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 PRRG3Q9BZD7 231 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 C11orf54Q9H0W9 315 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 SPNS1Q9H2V7 528 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 TIGARQ9NQ88 270 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SEC14L3Q9UDX4 400 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 IL36AQ9UHA7 158 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 PHF11Q9UIL8 331 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 A4GNTQ9UNA3 340 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 A0A1W2PQL4 384 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 HMGN4O00479 90 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 LRG1P02750 347 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 CFL1P23528 166 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 ERP29P30040 261 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 GABRA5P31644 462 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 MAPK12P53778 367 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 MANFP55145 182 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 PCBP4P57723 403 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 TMEM44Q2T9K0 475 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ARSIQ5FYB1 569 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 TNFAIP8L2Q6P589 184 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 DEF8Q6ZN54 512 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 VASH1Q7L8A9 365 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 C6orf120Q7Z4R8 191 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SLC7A13Q8TCU3 470 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 UFD1Q92890 307 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 COQ10AQ96MF6 247 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SPATA5L1Q9BVQ7 753 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 C11orf49Q9H6J7 331 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 NIPAL2Q9H841 368 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SIRT3Q9NTG7 399 aaPredicted RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 TBC1D14Q9P2M4 693 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 ADAM29Q9UKF5 820 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SLC9A8Q9Y2E8 581 aa13□□□□□ -0.33
VPS33A-208ENST00000543633 SF3B6Q9Y3B4 125 aaKnown RBP13□□□□□ -0.33
VPS33A-208ENST00000543633 ANKDD1BA6NHY2 528 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 ANHXE9PGG2 379 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 PLPP1O14494 284 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 PLD2O14939 933 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 TEX28O15482 410 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 PRODHO43272 600 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 PRKYO43930 277 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 GUCY1B2O75343 617 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 PPP2R1BP30154 601 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 NNMTP40261 264 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 OPRD1P41143 372 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 GAS1P54826 345 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 MINDY4Q4G0A6 757 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 ATAT1Q5SQI0 421 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 KHDRBS2Q5VWX1 349 aaKnown RBP12.99□□□□□ -0.33
VPS33A-208ENST00000543633 MZT2BQ6NZ67 158 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 C1orf94Q6P1W5 598 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 SYCE2Q6PIF2 218 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 SLC36A4Q6YBV0 504 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 DEFB128Q7Z7B8 93 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 TMEM25Q86YD3 366 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 TBC1D19Q8N5T2 526 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 BBS10Q8TAM1 723 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 TMEM163Q8TC26 289 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 ENKURQ8TC29 256 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 MRGPRX3Q96LB0 322 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 SOSTQ9BQB4 213 aa12.99□□□□□ -0.33
VPS33A-208ENST00000543633 MS4A8Q9BY19 250 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms