RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ASIC5Q9NY37 505 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 STMN3Q9NZ72 180 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 ATP6V1HQ9UI12 483 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 CES1P1Q9UKY3 287 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 ZNF451Q9Y4E5 1061 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 PCSK5Q92824 1860 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 ZFHX4Q86UP3 3567 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 C2orf92A0A1B0GVN3 265 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 A0A1W2PQ72 361 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 DYTNA2CJ06 578 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 GMNCA6NCL1 334 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 GABRR3A8MPY1 467 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 MYO1GB0I1T2 1018 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZNF195O14628 629 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 PRAMEF2O60811 474 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 SLC22A3O75751 556 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 BCAS2O75934 225 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 CPSF4O95639 269 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 DDAH2O95865 285 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 F10P00742 488 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ATP1B1P05026 303 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ABCB1P08183 1280 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 CT62P0C5K7 136 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 LAMP1P11279 417 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 EFNA1P20827 205 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 SSTR4P31391 388 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 GALNSP34059 522 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 SOAT1P35610 550 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 CASRP41180 1078 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 KIR3DL1P43629 444 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 PRKAG1P54619 331 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 UFM1P61960 85 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ARG2P78540 354 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 OC90Q02509 493 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 SRSF11Q05519 484 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 DUSP2Q05923 314 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 Q0VFX4 171 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 LY6DQ14210 128 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 EXOSC7Q15024 291 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 SPRED3Q2MJR0 410 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 LINC00303Q3SY05 128 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 PDCD4Q53EL6 469 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 LACTB2Q53H82 288 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZNF385BQ569K4 471 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 CRB2Q5IJ48 1285 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ANXA8L1Q5VT79 327 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 B3GNTL1Q67FW5 361 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 OR4F3Q6IEY1 312 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 TMEM107Q6UX40 140 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ISLR2Q6UXK2 745 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ASB18Q6ZVZ8 466 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZNF551Q7Z340 670 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 RPS19BP1Q86WX3 136 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZADH2Q8N4Q0 377 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 TMEM156Q8N614 296 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 AMER2Q8N7J2 671 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZNF321PQ8N8H1 164 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 NFAM1Q8NET5 270 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 OR7G1Q8NGA0 311 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 OR52R1Q8NGF1 315 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 OR5L2Q8NGL0 311 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 OR4A15Q8NGL6 344 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 SUN3Q8TAQ9 357 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.88□□□□□ -1.47
LTBR-212ENST00000543542 ELP5Q8TE02 316 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZNF721Q8TF20 911 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 TTC9Q92623 222 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ABHD17AQ96GS6 310 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 FBXL20Q96IG2 436 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 MAELQ96JY0 434 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZNF681Q96N22 645 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 UBL7Q96S82 380 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 NUDT9Q9BW91 350 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 BHLHE41Q9C0J9 482 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.88□□□□□ -1.47
LTBR-212ENST00000543542 OR10A5Q9H207 317 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ADNPQ9H2P0 1102 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 GLIPR2Q9H4G4 154 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 RABEP2Q9H5N1 569 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 LIN28AQ9H9Z2 209 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 CXorf21Q9HAI6 301 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 C3orf14Q9HBI5 128 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 ZNF71Q9NQZ8 489 aaPredicted RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 DDX18Q9NVP1 670 aaKnown RBP5.88□□□□□ -1.47
LTBR-212ENST00000543542 TAS2R7Q9NYW3 318 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 PRODH2Q9UF12 536 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 CFL2Q9Y281 166 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 TP53TG5Q9Y2B4 290 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 SNX8Q9Y5X2 465 aa5.88□□□□□ -1.47
LTBR-212ENST00000543542 SEC16AO15027 2179 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 OR6C76A6NM76 312 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 C9JVG2 144 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 HRKO00198 91 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 WWP2O00308 870 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 DPM1O60762 260 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TBX19O60806 448 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 COQ9O75208 318 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SLITRK5O94991 958 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ANP32DO95626 131 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms