RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 NUDT13Q86X67 352 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 OR4N5Q8IXE1 308 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 ZCCHC7Q8N3Z6 543 aaKnown RBP14.29□□□□□ -0.12
CSF1R-209ENST00000543093 C7orf57Q8NEG2 295 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 ANKRD9Q96BM1 317 aaPredicted RBP14.29□□□□□ -0.12
CSF1R-209ENST00000543093 SARAFQ96BY9 339 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 NSUN5Q96P11 429 aaKnown RBP14.29□□□□□ -0.12
CSF1R-209ENST00000543093 NTMT1Q9BV86 223 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 EPB41L4BQ9H329 900 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 MS4A12Q9NXJ0 267 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 DNAJB12Q9NXW2 375 aaKnown RBP14.29□□□□□ -0.12
CSF1R-209ENST00000543093 SPRR3Q9UBC9 169 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.29□□□□□ -0.12
CSF1R-209ENST00000543093 EXPH5Q8NEV8 1989 aa14.29□□□□□ -0.12
CSF1R-209ENST00000543093 FOXE1O00358 373 aaPredicted RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 FGF17O60258 216 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 COX7A2P14406 83 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 TAC1P20366 129 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 ENDOUP21128 410 aaKnown RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 BUD31P41223 144 aaPredicted RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 STT3AP46977 705 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 IFT88Q13099 833 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 MPEG1Q2M385 716 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 PIGGQ5H8A4 983 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 C10orf62Q5T681 223 aaPredicted RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 SLC22A10Q63ZE4 541 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 ARSKQ6UWY0 536 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 WDR53Q7Z5U6 358 aaPredicted RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 ZZZ3Q8IYH5 903 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 SLC22A8Q8TCC7 542 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 ACMSDQ8TDX5 336 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 UBLCP1Q8WVY7 318 aaPredicted RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 DGAT2Q96PD7 388 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 SERPINI1Q99574 410 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 ZBTB26Q9HCK0 441 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 LYARQ9NX58 379 aaKnown RBP14.28□□□□□ -0.12
CSF1R-209ENST00000543093 PSD3Q9NYI0 1048 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 TBK1Q9UHD2 729 aa14.28□□□□□ -0.12
CSF1R-209ENST00000543093 ITPR3Q14573 2671 aa14.27□□□□□ -0.12
CSF1R-209ENST00000543093 HCN1O60741 890 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 CTAG2O75638 210 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 SEMA3DO95025 777 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 OTCP00480 354 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 SBK3P0C264 359 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 CD99P14209 185 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 TLX1P31314 330 aaPredicted RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 NEK2P51955 445 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 HNRNPH2P55795 449 aaKnown RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 HERVK_113P63132 956 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 KCNJ2P63252 427 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 FOLH1Q04609 750 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 SNTB1Q13884 538 aaKnown RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 ZNF791Q3KP31 576 aaPredicted RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 SLC25A35Q3KQZ1 300 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 PRAMEF20Q5VT98 475 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 FRG2Q64ET8 278 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 CYP20A1Q6UW02 462 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 DGAT2L6Q6ZPD8 337 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 GPR180Q86V85 440 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 C9orf40Q8IXQ3 194 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 OR4F6Q8NGB9 312 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 NUBPLQ8TB37 319 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 PPWD1Q96BP3 646 aaKnown RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 POM121Q96HA1 1249 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 SENP5Q96HI0 755 aaPredicted RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 FRG2BQ96QU4 278 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 TMUB1Q9BVT8 246 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 C1QTNF3Q9BXJ4 246 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 ERVK-6Q9BXR3 956 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 ZNF717Q9BY31 904 aaPredicted RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 POLDIP3Q9BY77 421 aaKnown RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 ELOVL6Q9H5J4 265 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 RPF2Q9H7B2 306 aaKnown RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 SH2D2AQ9NP31 389 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 CCM2LQ9NUG4 571 aaPredicted RBP14.27□□□□□ -0.13
CSF1R-209ENST00000543093 TMEM216Q9P0N5 145 aa14.27□□□□□ -0.13
CSF1R-209ENST00000543093 A0A0A6YYD5 115 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 FAM47E-STBD1D6RA91 191 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 GOLGA8RI6L899 631 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 HRKO00198 91 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 EEDO75530 441 aaKnown RBP14.26□□□□□ -0.13
CSF1R-209ENST00000543093 IGKV3-11P04433 115 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 GSTA1P08263 222 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 RFPL3SP0C7P2 107 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 NR2F6P10588 404 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 GABRA1P14867 456 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 BSGP35613 385 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 IGLV3-21P80748 117 aaPredicted RBP14.26□□□□□ -0.13
CSF1R-209ENST00000543093 PLIN5Q00G26 463 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 KRTAP21-3Q3LHN1 58 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 RIPPLY2Q5TAB7 128 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 LYPD8Q6UX82 237 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 RPS27LQ71UM5 84 aaKnown RBP14.26□□□□□ -0.13
CSF1R-209ENST00000543093 MILR1Q7Z6M3 343 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 TMEM151AQ8N4L1 468 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 DOK4Q8TEW6 326 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 PAQR8Q8TEZ7 354 aa14.26□□□□□ -0.13
CSF1R-209ENST00000543093 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.26□□□□□ -0.13
CSF1R-209ENST00000543093 TANKQ92844 425 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms