RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 NADKO95544 446 aaPredicted RBP9.01□□□□□ -0.97
YBX3-212ENST00000542002 JUNP05412 331 aaKnown RBP9.01□□□□□ -0.97
YBX3-212ENST00000542002 COX7A2P14406 83 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 PRPH2P23942 346 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 SOX3P41225 446 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 SSR4P51571 173 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 NR0B1P51843 470 aaKnown RBP9.01□□□□□ -0.97
YBX3-212ENST00000542002 TDGF1P3P51864 188 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 C2orf80Q0P641 193 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 FUT7Q11130 342 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 MAP4K2Q12851 820 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 CASP8Q14790 479 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 CHI3L2Q15782 390 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 MAPKAPK3Q16644 382 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 PRICKLE4Q2TBC4 344 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 TRMT12Q53H54 448 aaKnown RBP9.01□□□□□ -0.97
YBX3-212ENST00000542002 SH2D4BQ5SQS7 431 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 IL20RBQ6UXL0 311 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 TMEM64Q6YI46 380 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 RNF165Q6ZSG1 346 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 GALNTL5Q7Z4T8 443 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 SULF2Q8IWU5 870 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 ZNF441Q8N8Z8 693 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 NUDT8Q8WV74 236 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 TWIST2Q8WVJ9 160 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 ARL8AQ96BM9 186 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 CTHRC1Q96CG8 243 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 TLCD1Q96CP7 247 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 FCRL1Q96LA6 429 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 SORT1Q99523 831 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 SLX1AQ9BQ83 275 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 ANKRA2Q9H9E1 313 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 DEPPQ9NTK1 212 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 MAT2BQ9NZL9 334 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 ABI3Q9P2A4 366 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 BAIAP2L1Q9UHR4 511 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 UTS2RQ9UKP6 389 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 VPS4AQ9UN37 437 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 DTX4Q9Y2E6 619 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 PCDHGB6Q9Y5F9 930 aa9.01□□□□□ -0.97
YBX3-212ENST00000542002 A0A0G2JMM0 328 aa9□□□□□ -0.97
YBX3-212ENST00000542002 ATP6AP2A0A1C7CYW4 349 aa9□□□□□ -0.97
YBX3-212ENST00000542002 A0A1W2PPB8 328 aa9□□□□□ -0.97
YBX3-212ENST00000542002 A0A1W2PRS3 328 aa9□□□□□ -0.97
YBX3-212ENST00000542002 PINLYPA6NC86 204 aa9□□□□□ -0.97
YBX3-212ENST00000542002 ASPDHA6ND91 283 aa9□□□□□ -0.97
YBX3-212ENST00000542002 KIR3DP1A8MWS1 328 aa9□□□□□ -0.97
YBX3-212ENST00000542002 SLC28A1O00337 649 aa9□□□□□ -0.97
YBX3-212ENST00000542002 FCHO1O14526 889 aa9□□□□□ -0.97
YBX3-212ENST00000542002 TM9SF1O15321 606 aa9□□□□□ -0.97
YBX3-212ENST00000542002 BIRC5O15392 142 aa9□□□□□ -0.97
YBX3-212ENST00000542002 ZNHIT1O43257 154 aa9□□□□□ -0.97
YBX3-212ENST00000542002 NME2P1O60361 137 aa9□□□□□ -0.97
YBX3-212ENST00000542002 SEMA7AO75326 666 aa9□□□□□ -0.97
YBX3-212ENST00000542002 ATP6AP2O75787 350 aa9□□□□□ -0.97
YBX3-212ENST00000542002 CBX7O95931 251 aa9□□□□□ -0.97
YBX3-212ENST00000542002 ATP1B1P05026 303 aa9□□□□□ -0.97
YBX3-212ENST00000542002 MYZAPP0CAP1 466 aa9□□□□□ -0.97
YBX3-212ENST00000542002 DRD2P14416 443 aa9□□□□□ -0.97
YBX3-212ENST00000542002 CD46P15529 392 aa9□□□□□ -0.97
YBX3-212ENST00000542002 PCSK2P16519 638 aa9□□□□□ -0.97
YBX3-212ENST00000542002 CSNK2A2P19784 350 aaPredicted RBP9□□□□□ -0.97
YBX3-212ENST00000542002 DDCP20711 480 aa9□□□□□ -0.97
YBX3-212ENST00000542002 NT5EP21589 574 aa9□□□□□ -0.97
YBX3-212ENST00000542002 BGNP21810 368 aa9□□□□□ -0.97
YBX3-212ENST00000542002 NME2P22392 152 aa9□□□□□ -0.97
YBX3-212ENST00000542002 MAGOHP61326 146 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 MRPS35P82673 323 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 EXOSC7Q15024 291 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 EBPQ15125 230 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 CEBPEQ15744 281 aa9□□□□□ -0.97
YBX3-212ENST00000542002 IMPG1Q17R60 797 aa9□□□□□ -0.97
YBX3-212ENST00000542002 MPEG1Q2M385 716 aa9□□□□□ -0.97
YBX3-212ENST00000542002 ZNF791Q3KP31 576 aaPredicted RBP9□□□□□ -0.97
YBX3-212ENST00000542002 ATCAYQ86WG3 371 aa9□□□□□ -0.97
YBX3-212ENST00000542002 GALNT12Q8IXK2 581 aa9□□□□□ -0.97
YBX3-212ENST00000542002 TMEM156Q8N614 296 aa9□□□□□ -0.97
YBX3-212ENST00000542002 CPSF7Q8N684 471 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 C7orf57Q8NEG2 295 aa9□□□□□ -0.97
YBX3-212ENST00000542002 OR5L2Q8NGL0 311 aa9□□□□□ -0.97
YBX3-212ENST00000542002 SUN3Q8TAQ9 357 aa9□□□□□ -0.97
YBX3-212ENST00000542002 FAM76AQ8TAV0 307 aa9□□□□□ -0.97
YBX3-212ENST00000542002 NUBPLQ8TB37 319 aa9□□□□□ -0.97
YBX3-212ENST00000542002 ADIPOR1Q96A54 375 aa9□□□□□ -0.97
YBX3-212ENST00000542002 EXOSC8Q96B26 276 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 KLHL29Q96CT2 875 aa9□□□□□ -0.97
YBX3-212ENST00000542002 PELOQ9BRX2 385 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 FAIM2Q9BWQ8 316 aa9□□□□□ -0.97
YBX3-212ENST00000542002 WWTR1Q9GZV5 400 aa9□□□□□ -0.97
YBX3-212ENST00000542002 OR10A5Q9H207 317 aa9□□□□□ -0.97
YBX3-212ENST00000542002 LRTM1Q9HBL6 345 aa9□□□□□ -0.97
YBX3-212ENST00000542002 EML4Q9HC35 981 aaKnown RBP9□□□□□ -0.97
YBX3-212ENST00000542002 SH2D2AQ9NP31 389 aa9□□□□□ -0.97
YBX3-212ENST00000542002 C1orf109Q9NX04 203 aa9□□□□□ -0.97
YBX3-212ENST00000542002 COPS7AQ9UBW8 275 aa9□□□□□ -0.97
YBX3-212ENST00000542002 CPAMD8Q8IZJ3 1885 aa9□□□□□ -0.97
YBX3-212ENST00000542002 SHANK1Q9Y566 2161 aa8.99□□□□□ -0.97
YBX3-212ENST00000542002 BAHCC1Q9P281 2608 aa8.99□□□□□ -0.97
YBX3-212ENST00000542002 TMEM120BA0PK00 339 aa8.99□□□□□ -0.97
YBX3-212ENST00000542002 ANKUB1A6NFN9 424 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms