RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TCTN2Q96GX1 697 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 FBXL20Q96IG2 436 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 DOHHQ9BU89 302 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 VCXQ9H320 206 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 EQTNQ9NQ60 294 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 SOHLH2Q9NX45 425 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 TRPC4Q9UBN4 977 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 EPHA6Q9UF33 1036 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 CSNK1G3Q9Y6M4 447 aa11.53□□□□□ -0.56
AP003559.1-201ENST00000540906 A0A1B0GTQ1 180 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 H3BMH7 237 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 HYAL3O43820 417 aaPredicted RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 CHRM4P08173 479 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 CPMP14384 443 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 DDX5P17844 614 aaKnown RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 CD247P20963 164 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 YAP1P46937 504 aaKnown RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 MAN2A2P49641 1150 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 EPHA4P54764 986 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ARSFP54793 590 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 SELENOWP63302 87 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 BLMHQ13867 455 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 DAG1Q14118 895 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ERV3-1Q14264 604 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 DUSP7Q16829 419 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 HLA-BQ31612 363 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ZIK1Q3SY52 487 aaPredicted RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ZC3H12BQ5HYM0 836 aaKnown RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 SNAP47Q5SQN1 464 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 MANEAQ5SRI9 462 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 REEP3Q6NUK4 255 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 LSRQ86X29 649 aaPredicted RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 LRRC25Q8N386 305 aaPredicted RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ZNF655Q8N720 491 aaPredicted RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 NUP43Q8NFH3 380 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 OR4K14Q8NGD5 310 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 SFXN5Q8TD22 340 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 XAGE5Q8WWM1 108 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 CCDC74AQ96AQ1 378 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ANKRD9Q96BM1 317 aaPredicted RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 NR1H4Q96RI1 486 aaPredicted RBP11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 NUDT22Q9BRQ3 303 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 YY1AP1Q9H869 796 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ANGPT4Q9Y264 503 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 ZNF780BQ9Y6R6 833 aa11.52□□□□□ -0.57
AP003559.1-201ENST00000540906 UNC13CQ8NB66 2214 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 J3KTA2 159 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 EMC8O43402 210 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 NUDT21O43809 227 aaKnown RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 PGM3O95394 542 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ZIC2O95409 532 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ALPLP05186 524 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 CT62P0C5K7 136 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 RAB38P57729 211 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 TXNL4AP83876 142 aaKnown RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 TRMT12Q53H54 448 aaKnown RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 PERM1Q5SV97 790 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 OR2T5Q6IEZ7 315 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 OR4D11Q8NGI4 311 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 OR2T29Q8NH02 315 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 SPPL2AQ8TCT8 520 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 SAP25Q8TEE9 199 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 APOBEC4Q8WW27 367 aaKnown RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 MBOAT4Q96T53 435 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ADI1Q9BV57 179 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 OSBPL11Q9BXB4 747 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 RAB33BQ9H082 229 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ANKHQ9HCJ1 492 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 SEMA3GQ9NS98 782 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 GIMAP4Q9NUV9 329 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ATXN7L1Q9ULK2 861 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 PLCL2Q9UPR0 1127 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 A8MU76 341 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 G3V2T6 193 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 AGRPO00253 132 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 GNGT2O14610 69 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 SLC28A2O43868 658 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 MITFO75030 526 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 CDC123O75794 336 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 MFN2O95140 757 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 FHP07954 510 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 GNSP15586 552 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 GLB1P16278 677 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 MPIP34949 423 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 HSPA13P48723 471 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ARRB1P49407 418 aaPredicted RBP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 CLCN2P51788 898 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 PPP2R2BQ00005 443 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 MGAT2Q10469 447 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 MERTKQ12866 999 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 PUM1Q14671 1186 aaKnown RBP eCLIP11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 NR1D2Q14995 579 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 LPAL2Q16609 132 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 ZNF628Q5EBL2 1059 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 FHL5Q5TD97 284 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 GUSBP11Q6P575 273 aa11.51□□□□□ -0.57
AP003559.1-201ENST00000540906 TMEM154Q6P9G4 183 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms