RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 KCND3Q9UK17 655 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 TMCC3Q9ULS5 477 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 KCNE3Q9Y6H6 103 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 MYO10Q9HD67 2058 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 WWP2O00308 870 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 KMOO15229 486 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 CNOT3O75175 753 aaKnown RBP10.89□□□□□ -0.67
C11orf54-214ENST00000540113 NR2F1P10589 423 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 BCL6P41182 706 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 NCBP2P52298 156 aaKnown RBP eCLIP10.89□□□□□ -0.672e-8■□□□□ 9.3
C11orf54-214ENST00000540113 AGERQ15109 404 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 SYCE2Q6PIF2 218 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 USP43Q70EL4 1123 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 CYP4Z2PQ8N1L4 340 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 OR2A1Q8NGT9 310 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 SLC7A13Q8TCU3 470 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 C16orf58Q96GQ5 468 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 CAMK1GQ96NX5 476 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 MGLLQ99685 303 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 MAPKAP1Q9BPZ7 522 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
C11orf54-214ENST00000540113 WDR26Q9H7D7 661 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 ZCCHC3Q9NUD5 404 aaKnown RBP10.89□□□□□ -0.67
C11orf54-214ENST00000540113 ZNF229Q9UJW7 825 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 FBXW2Q9UKT8 454 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 PCDHGA3Q9Y5H0 932 aa10.89□□□□□ -0.67
C11orf54-214ENST00000540113 SPTBN5Q9NRC6 3674 aaKnown RBP10.89□□□□□ -0.67
C11orf54-214ENST00000540113 ARHGAP33O14559 1287 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 FRS3O43559 492 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 KIAA0513O60268 411 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SEMA3DO95025 777 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 APOL3O95236 402 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 H1F0P07305 194 aaKnown RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 CXCR2P25025 360 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 TRIM23P36406 574 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 EIF2DP41214 584 aaKnown RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 KCNJ5P48544 419 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 RAB8AP61006 207 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SNRPNP63162 240 aaKnown RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 CBX3Q13185 183 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 KRT33BQ14525 404 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SSX1Q16384 188 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 TPRG1LQ5T0D9 272 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 C18orf63Q68DL7 685 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 KIAA1211LQ6NV74 962 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 PARM1Q6UWI2 310 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 PLEKHG7Q6ZR37 379 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 CCDC116Q8IYX3 515 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 TCEANCQ8N8B7 351 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 ZNF513Q8N8E2 541 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 GANCQ8TET4 914 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 CREB3L4Q8TEY5 395 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 FGF14Q92915 247 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 ZBED6CLQ96FA7 236 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SLC35G5Q96KT7 338 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 DZANK1Q9NVP4 752 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 CHCHD3Q9NX63 227 aaKnown RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 GPSM3Q9Y4H4 160 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 DNMT3AQ9Y6K1 912 aaPredicted RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 LRIT2A6NDA9 550 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 HAT1O14929 419 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 ERI3O43414 337 aaKnown RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 EPPINO95925 133 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 RPN2P04844 631 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 APODP05090 189 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 OSMP13725 252 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SPNP16150 400 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 PTNP21246 168 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 GDI1P31150 447 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 XKP51811 444 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 PPP5CP53041 499 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 RAB15P59190 212 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SLAMF1Q13291 335 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 PGBD2Q6P3X8 592 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 PODNL1Q6PEZ8 512 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 YAF2Q8IY57 180 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SLC34A3Q8N130 599 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 FBXL6Q8N531 539 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 TMEM145Q8NBT3 493 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 FAM46DQ8NEK8 389 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 ZNF354BQ96LW1 612 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 AMDHD1Q96NU7 426 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 FCRL4Q96PJ5 515 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 GPA33Q99795 319 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 POLR2J3Q9H1A7 115 aaKnown RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 RERGLQ9H628 205 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 EXOSC4Q9NPD3 245 aaKnown RBP10.88□□□□□ -0.67
C11orf54-214ENST00000540113 EQTNQ9NQ60 294 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 INIPQ9NRY2 104 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SPHK1Q9NYA1 384 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 TVP23BQ9NYZ1 205 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 ATG4BQ9Y4P1 393 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 DSPPQ9NZW4 1301 aa10.88□□□□□ -0.67
C11orf54-214ENST00000540113 SCN2AQ99250 2005 aa10.87□□□□□ -0.67
C11orf54-214ENST00000540113 TRBV23OR9-2A0A075B6M9 112 aa10.87□□□□□ -0.67
C11orf54-214ENST00000540113 A0A0A6YYD5 115 aa10.87□□□□□ -0.67
C11orf54-214ENST00000540113 AGAP5A6NIR3 686 aa10.87□□□□□ -0.67
C11orf54-214ENST00000540113 PDZK1P1A8MUH7 402 aa10.87□□□□□ -0.67
C11orf54-214ENST00000540113 ZSCAN9O15535 394 aaPredicted RBP10.87□□□□□ -0.67
C11orf54-214ENST00000540113 GPX5O75715 221 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms