RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SLX1AQ9BQ83 275 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 TMBIM4Q9HC24 238 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 EML4Q9HC35 981 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 UTS2RQ9UKP6 389 aa16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 EXO1Q9UQ84 846 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-203ENST00000540017 GOLGA6L10A6NI86 522 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 PIP5K1BO14986 540 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 BIRC5O15392 142 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 NME2P1O60361 137 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 SEC22BO75396 215 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 NADKO95544 446 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 ATP1B1P05026 303 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 MYZAPP0CAP1 466 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 CSNK2A2P19784 350 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 NME2P22392 152 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 TACR1P25103 407 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 SERPINB5P36952 375 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 TDGF1P3P51864 188 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF763Q0D2J5 394 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 CASP8Q14790 479 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 LTB4RQ15722 352 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 CHI3L2Q15782 390 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 PRICKLE4Q2TBC4 344 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 EIF2S3LQ2VIR3 472 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 PIGGQ5H8A4 983 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 FAM71E1Q6IPT2 247 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 IL20RBQ6UXL0 311 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 RNF111Q6ZNA4 994 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 CYP4Z2PQ8N1L4 340 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF615Q8N8J6 731 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 ADCY4Q8NFM4 1077 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 OR5L2Q8NGL0 311 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 CDC26Q8NHZ8 85 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 FAM76AQ8TAV0 307 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 NUBPLQ8TB37 319 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 EXOSC8Q96B26 276 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 EGLN2Q96KS0 407 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 C20orf27Q9GZN8 174 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 LRTM1Q9HBL6 345 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 OLAHQ9NV23 265 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 C1orf109Q9NX04 203 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 MAT2BQ9NZL9 334 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 PSME2Q9UL46 239 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 MYO18BQ8IUG5 2567 aa16.94■□□□□ 0.3
SNRPA1-203ENST00000540017 FLNCQ14315 2725 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 CLEC18AA5D8T8 446 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 ANKUB1A6NFN9 424 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 RGS14O43566 566 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 ZWINTO95229 277 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 C2orf80Q0P641 193 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 DUSP8Q13202 625 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 HEPACAMQ14CZ8 416 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 EBPQ15125 230 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 MPEG1Q2M385 716 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 RFTN2Q52LD8 501 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 LYPD8Q6UX82 237 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 CLEC18BQ6UXF7 455 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 DDIASQ8IXT1 998 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 TMEM178AQ8NBL3 297 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 CLEC18CQ8NCF0 446 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 ASB15Q8WXK1 588 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 NR4A3Q92570 626 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 TLCD1Q96CP7 247 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 FCRL1Q96LA6 429 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 C3orf30Q96M34 536 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 FRMD6Q96NE9 622 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 GAL3ST4Q96RP7 486 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 WWTR1Q9GZV5 400 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 MYNNQ9NPC7 610 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 GIMAP2Q9UG22 337 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF639Q9UID6 485 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF780BQ9Y6R6 833 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 COL12A1Q99715 3063 aa16.93■□□□□ 0.3
SNRPA1-203ENST00000540017 ASPDHA6ND91 283 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 OR6C76A6NM76 312 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 A8MVJ9 347 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 LSM1O15116 133 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 CHEK2O96017 543 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 SERPINE1P05121 402 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 BGNP21810 368 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 WDR4P57081 412 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 MAGOHP61326 146 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 MAP4K2Q12851 820 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 EXOSC7Q15024 291 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 RNFT1Q5M7Z0 435 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 SLC29A4Q7RTT9 530 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 CCDC116Q8IYX3 515 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 LRRC25Q8N386 305 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 VWA5B2Q8N398 1253 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 ZNF441Q8N8Z8 693 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 ANKRD42Q8N9B4 389 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 ST6GALNAC3Q8NDV1 305 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 DNAJB8Q8NHS0 232 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 PPP1R14CQ8TAE6 165 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 TMEM125Q96AQ2 219 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 CTHRC1Q96CG8 243 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 METTL2AQ96IZ6 378 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 BRINP2Q9C0B6 783 aa16.92■□□□□ 0.3
SNRPA1-203ENST00000540017 OR10A5Q9H207 317 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms