RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ATAT1Q5SQI0 421 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 C22orf42Q6IC83 251 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 PODNL1Q6PEZ8 512 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 ADGRF3Q8IZF5 1079 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 KRT78Q8N1N4 520 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 IQCF1Q8N6M8 205 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 CELF5Q8N6W0 485 aaKnown RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 AP3S1Q92572 193 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SOSTQ9BQB4 213 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 WFDC6Q9BQY6 131 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SMG9Q9H0W8 520 aaKnown RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 MVB12BQ9H7P6 319 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TRPV5Q9NQA5 729 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 PLSCR3Q9NRY6 295 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SEC14L3Q9UDX4 400 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 SF3B6Q9Y3B4 125 aaKnown RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 SPIN1Q9Y657 262 aaPredicted RBP9.16□□□□□ -0.94
CDH13-204ENST00000539548 MAU2Q9Y6X3 613 aa9.16□□□□□ -0.94
CDH13-204ENST00000539548 TMEM129A0AVI4 362 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ANHXE9PGG2 379 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 NEDD8-MDP1E9PL57 170 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 PLPP1O14494 284 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 SH3BP5O60239 455 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 NME6O75414 186 aaPredicted RBP9.15□□□□□ -0.94
CDH13-204ENST00000539548 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 HLA-DQB1P01920 261 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 CTSLP07711 333 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 FHP07954 510 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ELFN1P0C7U0 828 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 NR2F6P10588 404 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 CPN2P22792 545 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 FGF9P31371 208 aaPredicted RBP9.15□□□□□ -0.94
CDH13-204ENST00000539548 SDC2P34741 201 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 GPC1P35052 558 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 BSGP35613 385 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 SP3Q02447 781 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 QPRTQ15274 297 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 PYDC2Q56P42 97 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ENTPD8Q5MY95 495 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 LCN1P1Q5VSP4 162 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 PPP2R2DQ66LE6 453 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 TMEM215Q68D42 235 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ACSM5Q6NUN0 579 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 FAM180BQ6P0A1 224 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 LCTLQ6UWM7 567 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ZNF730Q6ZMV8 503 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 KIAA0907Q7Z7F0 614 aaPredicted RBP9.15□□□□□ -0.94
CDH13-204ENST00000539548 FAM129CQ86XR2 697 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 TBC1D19Q8N5T2 526 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ZNF557Q8N988 423 aaPredicted RBP9.15□□□□□ -0.94
CDH13-204ENST00000539548 GRPEL2Q8TAA5 225 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 MYLIPQ8WY64 445 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 SMPDL3AQ92484 453 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 TMEM203Q969S6 136 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 LRR1Q96L50 414 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 MRGPRX3Q96LB0 322 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 KATNB1Q9BVA0 655 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ZNF717Q9BY31 904 aaPredicted RBP9.15□□□□□ -0.94
CDH13-204ENST00000539548 RHBGQ9H310 441 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 ANKRA2Q9H9E1 313 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 NEUROD4Q9HD90 331 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 SIRT3Q9NTG7 399 aaPredicted RBP9.15□□□□□ -0.94
CDH13-204ENST00000539548 IL36AQ9UHA7 158 aa9.15□□□□□ -0.94
CDH13-204ENST00000539548 A0A0B4J293 547 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 SLC30A4O14863 429 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 HCN1O60741 890 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 TRIM3O75382 744 aaPredicted RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 TBX6O95947 436 aaPredicted RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 ACP2P11117 423 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 MYL12AP19105 171 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 MMP11P24347 488 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 ACADLP28330 430 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 MAPK12P53778 367 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PPP3R1P63098 170 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 RAB40BQ12829 278 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PIN1Q13526 163 aaPredicted RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 DUSP6Q16828 381 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 SPDYE7PQ495Y7 208 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 Q5BKY6 102 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PRAMEF14Q5SWL7 426 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 KHDRBS2Q5VWX1 349 aaKnown RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 C1orf94Q6P1W5 598 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 METAP1DQ6UB28 335 aaPredicted RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 QSOX2Q6ZRP7 698 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 ZER1Q7Z7L7 766 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 TCTE3Q8IZS6 198 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 OR7G1Q8NGA0 311 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 IRF7Q92985 503 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 TRIM63Q969Q1 353 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 RNF31Q96EP0 1072 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 C1GALT1C1Q96EU7 318 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 ZC3HAV1LQ96H79 300 aaKnown RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 ZNF764Q96H86 408 aaPredicted RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 LRIG1Q96JA1 1093 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 FYTTD1Q96QD9 318 aaKnown RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 TREX2Q9BQ50 279 aaPredicted RBP9.14□□□□□ -0.95
CDH13-204ENST00000539548 FNDC11Q9BVV2 318 aa9.14□□□□□ -0.95
CDH13-204ENST00000539548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDH13-204ENST00000539548 KLHL21Q9UJP4 597 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms