RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CD47Q08722 323 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 PUM1Q14671 1186 aaKnown RBP eCLIP13.95□□□□□ -0.18
ATL3-203ENST00000538786 MICAQ29983 383 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 C6orf141Q5SZD1 244 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 KLHL35Q6PF15 583 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 ZNF605Q86T29 641 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 CSNK1A1LQ8N752 337 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 TTC29Q8NA56 475 aaPredicted RBP13.95□□□□□ -0.18
ATL3-203ENST00000538786 SETD9Q8NE22 299 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 GPR32P1Q8NGA4 272 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 PROX1Q92786 737 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 DNAAF2Q9NVR5 837 aaKnown RBP13.95□□□□□ -0.18
ATL3-203ENST00000538786 GPC6Q9Y625 555 aaPredicted RBP13.95□□□□□ -0.18
ATL3-203ENST00000538786 HSPE1-MOB4S4R3N1 261 aa13.95□□□□□ -0.18
ATL3-203ENST00000538786 CRHBPP24387 322 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 MC3RP41968 323 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 KCNJ5P48544 419 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 CRISP3P54108 245 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 MAZP56270 477 aaKnown RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 RAPSNQ13702 412 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 SIM2Q14190 667 aaPredicted RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 LASP1Q14847 261 aaKnown RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 MEP1AQ16819 746 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 CTU2Q2VPK5 515 aaKnown RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 KRT73Q86Y46 540 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 LRRC25Q8N386 305 aaPredicted RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 ARL14Q8N4G2 192 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 OR4K14Q8NGD5 310 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 BBS10Q8TAM1 723 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 LMX1AQ8TE12 382 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 FBLIM1Q8WUP2 373 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 COL21A1Q96P44 957 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 ADNPQ9H2P0 1102 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 UCK1Q9HA47 277 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 BCL2L10Q9HD36 194 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 ACER3Q9NUN7 267 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 NDRG4Q9ULP0 352 aaKnown RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 MRPS2Q9Y399 296 aaKnown RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 A8MVJ9 347 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 J3KTA2 159 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 UBXN7O94888 489 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 CYP4B1P13584 511 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 ANXA8P13928 327 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 ETS2P15036 469 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 IL7RP16871 459 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 GSTT1P30711 240 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 LIMS1P48059 325 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 CLK3P49761 638 aaKnown RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 XKP51811 444 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 ESRRGP62508 458 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 TOP3AQ13472 1001 aaPredicted RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 EXOC3L2Q2M3D2 409 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 LGI4Q8N135 537 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 NUP43Q8NFH3 380 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 OR10G2Q8NGC3 310 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 NCSTNQ92542 709 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 CLDN23Q96B33 292 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 ZNF354BQ96LW1 612 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 CSF3RQ99062 836 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 FEVQ99581 238 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 CCDC3Q9BQI4 270 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 YIPF4Q9BSR8 244 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 SPATA5L1Q9BVQ7 753 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 RSPO3Q9BXY4 272 aaPredicted RBP13.94□□□□□ -0.18
ATL3-203ENST00000538786 GABARAPL3Q9BY60 117 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 TBC1D17Q9HA65 648 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 NTMQ9P121 344 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 SEC14L3Q9UDX4 400 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 BLOC1S6Q9UL45 172 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 DOLKQ9UPQ8 538 aa13.94□□□□□ -0.18
ATL3-203ENST00000538786 ASNA1O43681 348 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 GALR3O60755 368 aaPredicted RBP13.93□□□□□ -0.18
ATL3-203ENST00000538786 DNAJB6O75190 326 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 GADD45GO95257 159 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 ST6GAL1P15907 406 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 EEF1B2P24534 225 aaKnown RBP13.93□□□□□ -0.18
ATL3-203ENST00000538786 VSX2P58304 361 aaPredicted RBP13.93□□□□□ -0.18
ATL3-203ENST00000538786 SIM1P81133 766 aaPredicted RBP13.93□□□□□ -0.18
ATL3-203ENST00000538786 NPRL3Q12980 569 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 PRAMEF8Q5VWM4 474 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 PRAMEF7Q5VXH5 474 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 ZNF773Q6PK81 442 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 USP53Q70EK8 1073 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 SLC5A8Q8N695 610 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 OR52J3Q8NH60 311 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 TMIGD2Q96BF3 282 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 C16orf58Q96GQ5 468 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 SPACA7Q96KW9 195 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 HSPA12BQ96MM6 686 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 APOL4Q9BPW4 351 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 PSD2Q9BQI7 771 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.93□□□□□ -0.18
ATL3-203ENST00000538786 KCND3Q9UK17 655 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 GMPPBQ9Y5P6 360 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 CEPT1Q9Y6K0 416 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 SPACA6W5XKT8 324 aa13.93□□□□□ -0.18
ATL3-203ENST00000538786 MDC1Q14676 2089 aaKnown RBP13.93□□□□□ -0.18
ATL3-203ENST00000538786 A0A0G2JPF8 293 aa13.92□□□□□ -0.18
ATL3-203ENST00000538786 CCDC160A6NGH7 325 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms