RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CCDC116Q8IYX3 515 aa23.53■■□□□ 1.36
RAB40C-204ENST00000538492 FGF14Q92915 247 aa23.53■■□□□ 1.36
RAB40C-204ENST00000538492 ZNF764Q96H86 408 aaPredicted RBP23.53■■□□□ 1.36
RAB40C-204ENST00000538492 CHCHD6Q9BRQ6 235 aa23.53■■□□□ 1.36
RAB40C-204ENST00000538492 FAIM2Q9BWQ8 316 aa23.53■■□□□ 1.36
RAB40C-204ENST00000538492 SLC17A9Q9BYT1 436 aa23.53■■□□□ 1.36
RAB40C-204ENST00000538492 MVB12BQ9H7P6 319 aa23.53■■□□□ 1.36
RAB40C-204ENST00000538492 SYNPO2LQ9H987 977 aa23.53■■□□□ 1.36
RAB40C-204ENST00000538492 ENTPD6O75354 484 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 NTSP30990 170 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 IGFALSP35858 605 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 GSTM5P46439 218 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 TRA2BP62995 288 aaKnown RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 DUSP2Q05923 314 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 TARDBPQ13148 414 aaKnown RBP eCLIP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 MLC1Q15049 377 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 PARM1Q6UWI2 310 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 WDR53Q7Z5U6 358 aaPredicted RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 UBE2Q1Q7Z7E8 422 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 CACTIN-AS1Q8N1I8 211 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 TTLQ8NG68 377 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 CENPOQ9BU64 300 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 C1QTNF2Q9BXJ5 285 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 SCHIP1Q9P0W5 487 aaPredicted RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 IFT52Q9Y366 437 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 GPC6Q9Y625 555 aaPredicted RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 A0A1W2PR48 441 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 EFCAB10A6NFE3 127 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 MPZL2O60487 215 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 PBX2P40425 430 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 EIF2DP41214 584 aaKnown RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 LASP1Q14847 261 aaKnown RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 OXA1LQ15070 435 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 ZNF404Q494X3 552 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 NIPAL1Q6NVV3 410 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 NUDT18Q6ZVK8 323 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 ACOT4Q8N9L9 421 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 RASSF5Q8WWW0 418 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 C6orf62Q9GZU0 229 aaPredicted RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 CTPS2Q9NRF8 586 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 DNAJC27Q9NZQ0 273 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 SLC17A4Q9Y2C5 497 aa23.52■■□□□ 1.36
RAB40C-204ENST00000538492 YBX2Q9Y2T7 364 aaKnown RBP23.52■■□□□ 1.36
RAB40C-204ENST00000538492 SH3D21A4FU49 640 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 FAAHO00519 579 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 SLC31A1O15431 190 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 UGT2B17O75795 530 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 HIST1H1TP22492 207 aaPredicted RBP23.51■■□□□ 1.35
RAB40C-204ENST00000538492 PPP2R1BP30154 601 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 UGT2B15P54855 530 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 RAB8AP61006 207 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 TUBA1BP68363 451 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 ZIC1Q15915 447 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 FBXO43Q4G163 708 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 TMEM35AQ53FP2 167 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 ZNF776Q68DI1 518 aaPredicted RBP23.51■■□□□ 1.35
RAB40C-204ENST00000538492 C18orf63Q68DL7 685 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 PGBD2Q6P3X8 592 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 TUBA1AQ71U36 451 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 TBC1D19Q8N5T2 526 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 OR2L3Q8NG85 312 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 MYADMQ96S97 322 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 POLR2J3Q9H1A7 115 aaKnown RBP23.51■■□□□ 1.35
RAB40C-204ENST00000538492 PRDM7Q9NQW5 492 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 IRAK4Q9NWZ3 460 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 A4GNTQ9UNA3 340 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 MGAT4BQ9UQ53 548 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 SCN3AQ9NY46 2000 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 CERS1P27544 350 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 PEBP1P30086 187 aaKnown RBP23.51■■□□□ 1.35
RAB40C-204ENST00000538492 DOC2BQ14184 412 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 UAP1L1Q3KQV9 507 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 TOR1AIP1Q5JTV8 583 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 USP43Q70EL4 1123 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 WDR36Q8NI36 951 aaKnown RBP23.51■■□□□ 1.35
RAB40C-204ENST00000538492 CNRIP1Q96F85 164 aaPredicted RBP23.51■■□□□ 1.35
RAB40C-204ENST00000538492 MROQ9BYG7 248 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 EHD3Q9NZN3 535 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 ASB4Q9Y574 426 aa23.51■■□□□ 1.35
RAB40C-204ENST00000538492 UGT2B10P36537 528 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 XKP51811 444 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 ITPRIPL2Q3MIP1 535 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 ABHD17CQ6PCB6 329 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 BCDIN3DQ7Z5W3 292 aaKnown RBP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 KRT73Q86Y46 540 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 CLIP4Q8N3C7 705 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 CRELD1Q96HD1 420 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 DHRS1Q96LJ7 313 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 TRMT61BQ9BVS5 477 aaKnown RBP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 CDCA4Q9BXL8 241 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 ANKRA2Q9H9E1 313 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 TRNAU1APQ9NX07 287 aaKnown RBP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 RNGTTO60942 597 aaKnown RBP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 HMGN2P05204 90 aaKnown RBP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 LSM11P83369 360 aaKnown RBP eCLIP23.5■■□□□ 1.35
RAB40C-204ENST00000538492 ILKQ13418 452 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 DNASE1L3Q13609 305 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 LRRC32Q14392 662 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 PLAG1Q6DJT9 500 aa23.5■■□□□ 1.35
RAB40C-204ENST00000538492 TMEM107Q6UX40 140 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms