RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 KHDRBS2Q5VWX1 349 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 SYDE1Q6ZW31 735 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 PACS2Q86VP3 889 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 ST13P4Q8IZP2 240 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 TAGAPQ8N103 731 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 RNF175Q8N4F7 328 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 ZNF592Q92610 1267 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 TANKQ92844 425 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 WDYHV1Q96HA8 205 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 DERL2Q9GZP9 239 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 DDX47Q9H0S4 455 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 OR51B5Q9H339 312 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 UBQLN3Q9H347 655 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 TEX264Q9Y6I9 313 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 MED12LQ86YW9 2145 aa12.8□□□□□ -0.36
SMARCA4-206ENST00000538456 ANKRD33BA6NCL7 494 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 WASHC1A8K0Z3 465 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 SMPD2O60906 423 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 CLPSP04118 112 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 CCDC166P0CW27 439 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 SSTR4P31391 388 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 SOX18P35713 384 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 HNRNPH2P55795 449 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 SPRED3Q2MJR0 410 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 OR4C11Q6IEV9 310 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 SULT1C3Q6IMI6 304 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 MED27Q6P2C8 311 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 PLXDC2Q6UX71 529 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 GPR180Q86V85 440 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 C7orf57Q8NEG2 295 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 SPPL2AQ8TCT8 520 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 RIT1Q92963 219 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 ABTB1Q969K4 478 aaPredicted RBP12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 CMTM7Q96FZ5 175 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 Q96MF0 132 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 DACH2Q96NX9 599 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 RHOJQ9H4E5 214 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 CALHM2Q9HA72 323 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 POPDC3Q9HBV1 291 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 MS4A12Q9NXJ0 267 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 PHF11Q9UIL8 331 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 EIF3LQ9Y262 564 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
SMARCA4-206ENST00000538456 ATRQ13535 2644 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 OR6C76A6NM76 312 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 CAPN14A8MX76 684 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 PLPP1O14494 284 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 GNB5O14775 395 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 CASKO14936 926 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 PHGDHO43175 533 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 SNX4O95219 450 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 IL18BPO95998 194 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 S100BP04271 92 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 CYP4B1P13584 511 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 TLX1P31314 330 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 CPOXP36551 454 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 SLCO1A2P46721 670 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 NAGLUP54802 743 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 BIKQ13323 160 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 FASTKD3Q14CZ7 662 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 TBCCQ15814 346 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 NHSL2Q5HYW2 709 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 HLA-DQA1Q5Y7H0 255 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 CAPN12Q6ZSI9 719 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 YRDCQ86U90 279 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 GCNT2Q8N0V5 402 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 ZNF441Q8N8Z8 693 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 OR7G3Q8NG95 312 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 SLC44A1Q8WWI5 657 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 SMPDL3BQ92485 455 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 UBE2E3Q969T4 207 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 ISL2Q96A47 359 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 RGMAQ96B86 450 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 TRIM44Q96DX7 344 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 ANGPTL4Q9BY76 406 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 C6orf203Q9P0P8 240 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 PTBP2Q9UKA9 531 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 NPFFR2Q9Y5X5 522 aa12.78□□□□□ -0.36
SMARCA4-206ENST00000538456 A0A1W2PS29 197 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 TRIM64BA6NI03 449 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 INAFM1C9JVW0 142 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 H0Y3Z8 333 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 CES2O00748 559 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 WISP3O95389 354 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 GPR75O95800 540 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 NR2F6P10588 404 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 CD1DP15813 335 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 IVDP26440 423 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 BUD31P41223 144 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 CASP3P42574 277 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 CASP2P42575 452 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 TMED10P49755 219 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 SRYQ05066 204 aa12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 FRG1Q14331 258 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-206ENST00000538456 CDKL4Q5MAI5 379 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms