RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 GPR143P51810 404 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CDH11P55287 796 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 MAT1AQ00266 395 aaKnown RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 TIGD6Q17RP2 521 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 RPS26P11Q5JNZ5 115 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 COMMD6Q7Z4G1 85 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 PIGWQ7Z7B1 504 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 OMA1Q96E52 524 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 OR5B2Q96R09 309 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SMURF1Q9HCE7 757 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SRA1Q9HD15 236 aaKnown RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 IGSF5Q9NSI5 407 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NSG1A0A0A6YYJ2 146 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 hCG_1807616A0A1W2PRN6 198 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 HTR3EA5X5Y0 456 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 GRXCR2A6NFK2 248 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 AQP12BA6NM10 295 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 C2CD4DB7Z1M9 353 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SOX30O94993 753 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 F10P00742 488 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ERVPABLB-1P60509 514 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 STK11Q15831 433 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 RPE65Q16518 533 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 KANK2Q63ZY3 851 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 LCTLQ6UWM7 567 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 MARCH9Q86YJ5 346 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 AQP12AQ8IXF9 295 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SCML4Q8N228 414 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NEIL2Q969S2 332 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NXPE3Q969Y0 559 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 BORCS8Q96FH0 119 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SFXN2Q96NB2 322 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 OR51B6Q9H340 312 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SLAMF7Q9NQ25 335 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 IL17CQ9P0M4 197 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 LOC100130705A0A1B0GUX0 176 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TRMUO75648 421 aaKnown RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 PLATP00750 562 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 RPS3P23396 243 aaKnown RBP eCLIP5.1□□□□□ -1.59
LRP6-203ENST00000538239 SLC18A1P54219 525 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ZNF551Q7Z340 670 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 MSANTD3Q96H12 275 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ADAMTS6Q9UKP5 1117 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ERVK-19Q9WJR5 959 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NPIPA5A0A0B4J1W7 369 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 GJE1A6NN92 205 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NPIPA7E9PJI5 369 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ABLIM3O94929 683 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NPIPA8P0DM63 369 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CKMT2P17540 419 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CTHP32929 405 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 GPR4P46093 362 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CCL11P51671 97 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ADAM8P78325 824 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 E2F2Q14209 437 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 LACTB2Q53H82 288 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 NANOGP8Q6NSW7 305 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TSSK4Q6SA08 328 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 PIK3R3Q92569 461 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 INSM2Q96T92 566 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 NANOGQ9H9S0 305 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ZNF99A8MXY4 864 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 F3P13726 295 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NAA10P41227 235 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 MC3RP41968 323 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ATP4BP51164 291 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ZNF140P52738 457 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 OR1D5P58170 312 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SERTAD2Q14140 314 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 STEAP4Q687X5 459 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 BICRALQ6AI39 1079 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 RANBP10Q6VN20 620 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CBARPQ8N350 705 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 CNEP1R1Q8N9A8 125 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CEP76Q8TAP6 659 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 NR4A3Q92570 626 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 PTERQ96BW5 349 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ASB16Q96NS5 453 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ZNF559Q9BR84 538 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 MND1Q9BWT6 205 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 DMRT3Q9NQL9 472 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TAS2R7Q9NYW3 318 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 PRKCAP17252 672 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ENDOUP21128 410 aaKnown RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 ZP2Q05996 745 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 LHX8Q68G74 356 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 RFLNAQ6ZTI6 216 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 PIANPQ8IYJ0 282 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TCEANCQ8N8B7 351 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 HTRA1Q92743 480 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 RHBDF1Q96CC6 855 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 FAM129BQ96TA1 746 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TIMM29Q9BSF4 260 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TM9SF3Q9HD45 589 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 DIABLOQ9NR28 239 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CUTCQ9NTM9 273 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 PCTPQ9UKL6 214 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SRPK3Q9UPE1 567 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ZNF432O94892 652 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms