RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 LIX1Q8N485 282 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 RBMXL3Q8N7X1 1067 aaKnown RBP20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 ZNF321PQ8N8H1 164 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 SUN3Q8TAQ9 357 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 ZNF675Q8TD23 568 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 HAS2Q92819 552 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 EXOSC8Q96B26 276 aaKnown RBP20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 C1orf50Q9BV19 199 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 DEFB126Q9BYW3 111 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 GIMAP4Q9NUV9 329 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 COPS7AQ9UBW8 275 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 ZNF639Q9UID6 485 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 ENTPD4Q9Y227 616 aa20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 SPENQ96T58 3664 aaKnown RBP20.41■□□□□ 0.86
RHBDL3-204ENST00000538145 TMEM200CA6NKL6 621 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 HRKO00198 91 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 CLPSP04118 112 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 CT62P0C5K7 136 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 LBPP18428 481 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 NT5EP21589 574 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 RPL3P39023 403 aaKnown RBP20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 PTGR1Q14914 329 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 ABHD17BQ5VST6 288 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 FAM180BQ6P0A1 224 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 LINC00696Q6ZRV3 163 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 ZNF605Q86T29 641 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 RPS19BP1Q86WX3 136 aaKnown RBP20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 STMN3Q9NZ72 180 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 MAT2BQ9NZL9 334 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 ATP6V1HQ9UI12 483 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 ERVK-19Q9WJR5 959 aa20.4■□□□□ 0.86
RHBDL3-204ENST00000538145 PRKNO60260 465 aaPredicted RBP20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 G6PDP11413 515 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 PLA2G2AP14555 144 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 PCSK2P16519 638 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 S1PR1P21453 382 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 MPIP34949 423 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 CD97P48960 835 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 SLC37A1P57057 533 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 MLF1P58340 268 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 RNF4P78317 190 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 KLRB1Q12918 225 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 ZNF267Q14586 743 aaPredicted RBP20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 ZNF628Q5EBL2 1059 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 FCRLBQ6BAA4 426 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 Q6ZS92 163 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 R3HCC1LQ7Z5L2 792 aaKnown RBP20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 RIMKLAQ8IXN7 391 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 CCDC116Q8IYX3 515 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 ZADH2Q8N4Q0 377 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 OR7G1Q8NGA0 311 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 CLHC1Q8NHS4 586 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 NUBPLQ8TB37 319 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 ERP27Q96DN0 273 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 CNPPD1Q9BV87 410 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 CDCP1Q9H5V8 836 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 RYDENQ9NUL5 291 aaKnown RBP20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 USH1CQ9Y6N9 552 aa20.39■□□□□ 0.85
RHBDL3-204ENST00000538145 OR6C76A6NM76 312 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 GABRR3A8MPY1 467 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 MAN1A2O60476 641 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 TGDSO95455 350 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 DDX5P17844 614 aaKnown RBP20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 EPHA3P29320 983 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 FRKP42685 505 aaPredicted RBP20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 CLDN8P56748 225 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 FAM9CQ8IZT9 166 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 VWA5B2Q8N398 1253 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 ZNF615Q8N8J6 731 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 OR5L2Q8NGL0 311 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 ACTRT2Q8TDY3 377 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 GFM2Q969S9 779 aaKnown RBP20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 PPCDCQ96CD2 204 aa20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 WDR55Q9H6Y2 383 aaPredicted RBP20.38■□□□□ 0.85
RHBDL3-204ENST00000538145 SCAMP2O15127 329 aaKnown RBP20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 SLITRK5O94991 958 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 LRATO95237 230 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 WDPCPO95876 746 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 IFI6P09912 130 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 PRPS1L1P21108 318 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 TRHRP34981 398 aaPredicted RBP20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 HPCAL1P37235 193 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 DIO3P55073 304 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 NFATC3Q12968 1075 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 MPEG1Q2M385 716 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 ZNF385BQ569K4 471 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 C6orf163Q5TEZ5 329 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 FAM111BQ6SJ93 734 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 EPGNQ6UW88 154 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 RNF111Q6ZNA4 994 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 SPATA19Q7Z5L4 167 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 C9orf40Q8IXQ3 194 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 BEST3Q8N1M1 668 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 BBS4Q96RK4 519 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 TRIM45Q9H8W5 580 aaPredicted RBP20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 ABI3Q9P2A4 366 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 MYOTQ9UBF9 498 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 ANAPC2Q9UJX6 822 aa20.37■□□□□ 0.85
RHBDL3-204ENST00000538145 MAPRE3Q9UPY8 281 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms