RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 UBXN7O94888 489 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 KRT75O95678 551 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 CLPTM1O96005 669 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 TFAP2AP05549 437 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 ANKRD34CP0C6C1 535 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 EFNA1P20827 205 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 TSPAN7P41732 249 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 CAPZBP47756 277 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 GFERP55789 205 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 TUBA4AP68366 448 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 RNF220Q5VTB9 566 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 ZNF425Q6IV72 752 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 CCDC80Q76M96 950 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 PATL1Q86TB9 770 aaKnown RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 HIPK1Q86Z02 1210 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 ZDHHC21Q8IVQ6 265 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 SLC30A8Q8IWU4 369 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 TBC1D19Q8N5T2 526 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 OR2L3Q8NG85 312 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 OR5P2Q8WZ92 322 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 CIDECQ96AQ7 238 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 RMND5BQ96G75 393 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 RBM4BQ9BQ04 359 aaKnown RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 SLC35A5Q9BS91 424 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 RBM4Q9BWF3 364 aaKnown RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 SORBS1Q9BX66 1292 aaKnown RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 SLC6A16Q9GZN6 736 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 GABARAPL1Q9H0R8 117 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 MRPS30Q9NP92 439 aaKnown RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 MIEF1Q9NQG6 463 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 OCIAD1Q9NX40 245 aa12.14□□□□□ -0.47
PEX11B-203ENST00000537888 IFT80Q9P2H3 777 aaPredicted RBP12.14□□□□□ -0.47
PEX11B-203ENST00000537888 A0A0A6YYD5 115 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 LRIT2A6NDA9 550 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 TRIM64CA6NLI5 447 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 KLK10O43240 276 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 SNAP29O95721 258 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 ALBP02768 609 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 THRBP10828 461 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 TYRP1P17643 537 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 UQCRC2P22695 453 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 CMPK1P30085 196 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 PEBP1P30086 187 aaKnown RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 GRK3P35626 688 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 DCTP40126 519 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 MAPK10P53779 464 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 CYP4F2P78329 520 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 EEF1A2Q05639 463 aaKnown RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 MLC1Q15049 377 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 GCNT6Q5T4J0 391 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 OR4C11Q6IEV9 310 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 TRIM40Q6P9F5 258 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 SHQ1Q6PI26 577 aaKnown RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 STK32CQ86UX6 486 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 DTX1Q86Y01 620 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 ZFPM2Q8WW38 1151 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 NRBF2Q96F24 287 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 DPH2Q9BQC3 489 aaPredicted RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 RAB33BQ9H082 229 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 CLK4Q9HAZ1 481 aaKnown RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 SLC6A20Q9NP91 592 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 C1GALT1Q9NS00 363 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 SIDT1Q9NXL6 827 aaKnown RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 TUBA8Q9NY65 449 aaPredicted RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 EHD3Q9NZN3 535 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 AKAP7Q9P0M2 348 aaPredicted RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 EPHA6Q9UF33 1036 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 UTS2RQ9UKP6 389 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 SNX7Q9UNH6 387 aa12.13□□□□□ -0.47
PEX11B-203ENST00000537888 FAF1Q9UNN5 650 aaPredicted RBP12.13□□□□□ -0.47
PEX11B-203ENST00000537888 SDK2Q58EX2 2172 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 GNGT2O14610 69 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 ZNF682O95780 498 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 GNAO1P09471 354 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 LIPCP11150 499 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 DRD2P14416 443 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 CSTF2P33240 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 BCL6P41182 706 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 TSFMP43897 325 aaKnown RBP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 NR1H2P55055 460 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 TGIF1Q15583 401 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 ZNF630Q2M218 657 aaPredicted RBP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 RFX4Q33E94 735 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 ZC3H12BQ5HYM0 836 aaKnown RBP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 OR2T5Q6IEZ7 315 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 AMIGO1Q86WK6 493 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 PLXDC1Q8IUK5 500 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 CLEC4FQ8N1N0 589 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 MFSD9Q8NBP5 474 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 TSPAN14Q8NG11 270 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 OR2T29Q8NH02 315 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 PSMA8Q8TAA3 256 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 PNPT1Q8TCS8 783 aaKnown RBP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 SNRNP27Q8WVK2 155 aaKnown RBP12.12□□□□□ -0.47
PEX11B-203ENST00000537888 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
PEX11B-203ENST00000537888 DDA1Q9BW61 102 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms