RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 SH2D2AQ9NP31 389 aa8.21□□□□□ -1.1
SMAD3-203ENST00000537194 RRAGDQ9NQL2 400 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-203ENST00000537194 AHSPQ9NZD4 102 aa8.21□□□□□ -1.1
SMAD3-203ENST00000537194 EIF3LQ9Y262 564 aaKnown RBP8.21□□□□□ -1.1
SMAD3-203ENST00000537194 CFL2Q9Y281 166 aa8.21□□□□□ -1.1
SMAD3-203ENST00000537194 MTO1Q9Y2Z2 717 aaKnown RBP8.21□□□□□ -1.1
SMAD3-203ENST00000537194 NIPBLQ6KC79 2804 aaeCLIP8.21□□□□□ -1.1
SMAD3-203ENST00000537194 EIF3HO15372 352 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 GUCY1B2O75343 617 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 ACSL3O95573 720 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 TBX6O95947 436 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 IL18BPO95998 194 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 GSTA2P09210 222 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 LTA4HP09960 611 aaKnown RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 SLC35E2BP0CK96 405 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 SLC35E2P0CK97 266 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CYP4B1P13584 511 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 GFAPP14136 432 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CD22P20273 847 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CRABP2P29373 138 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CEACAM8P31997 349 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 PIK3CGP48736 1102 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 DIO3P55073 304 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 SLMAPQ14BN4 828 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 OR4D1Q15615 310 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 DEFB113Q30KQ7 82 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 GRTP1Q5TC63 336 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 LIPJQ5W064 366 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 NSUN5P2Q63ZY6 315 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 C18orf63Q68DL7 685 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 OR52E8Q6IFG1 317 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 ADNP2Q6IQ32 1131 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 GRHL2Q6ISB3 625 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 C3orf62Q6ZUJ4 267 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 PAGE2Q7Z2X7 111 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 UBE3DQ7Z6J8 389 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 GALNT12Q8IXK2 581 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 TEX9Q8N6V9 391 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 TNIP2Q8NFZ5 429 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 OR1J4Q8NGS1 313 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 HUS1BQ8NHY5 278 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 ABTB1Q969K4 478 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 ATP6V1E2Q96A05 226 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 RILPQ96NA2 401 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 ZFP3Q96NJ6 502 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 MTERF1Q99551 399 aaKnown RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 RBBP8Q99708 897 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 TIMP4Q99727 224 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 EPB41L4BQ9H329 900 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 ALG9Q9H6U8 611 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 METTL7AQ9H8H3 244 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CALHM2Q9HA72 323 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 PLAC1Q9HBJ0 212 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 SAYSD1Q9NPB0 183 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 RNF14Q9UBS8 474 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 NDRG3Q9UGV2 375 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CNOT11Q9UKZ1 510 aaKnown RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CBLCQ9ULV8 474 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 NPFFR2Q9Y5X5 522 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CHCHD2Q9Y6H1 151 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 FLNAP21333 2647 aaKnown RBP8.2□□□□□ -1.1
SMAD3-203ENST00000537194 MED12Q93074 2177 aa8.2□□□□□ -1.1
SMAD3-203ENST00000537194 CCDC189A1A4V9 331 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 GOLGA6L10A6NI86 522 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 LRRC3CA6NJW4 275 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 CD8B2A6NJW9 211 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 E7ESA3 106 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 UGDHO60701 494 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 ZNF354AO60765 605 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 PRAMEF4O60810 478 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 KERAO60938 352 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 TRIM3O75382 744 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 LRATO95237 230 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 ACTL6AO96019 429 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 FAM58BPP0C7Q3 252 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 TMIGD3P0DMS9 266 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 CDK9P50750 372 aaKnown RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 SLC37A1P57057 533 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 ADAM8P78325 824 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 CRYZQ08257 329 aaKnown RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 FASTKD3Q14CZ7 662 aaKnown RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 EBPQ15125 230 aaKnown RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 PCBP2Q15366 365 aaKnown RBP eCLIP8.19□□□□□ -1.12e-6■■■■■ 27.4
SMAD3-203ENST00000537194 FAM83EQ2M2I3 478 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 KBTBD12Q3ZCT8 623 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 PRAMEF9Q5VWM5 478 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 SHEQ5VZ18 495 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 TTC19Q6DKK2 380 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 CHMP1BQ7LBR1 199 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 NUDT13Q86X67 352 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 MED12LQ86YW9 2145 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 P3H2Q8IVL5 708 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 MMP21Q8N119 569 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 RELL2Q8NC24 303 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-203ENST00000537194 OR7G1Q8NGA0 311 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 OR4K14Q8NGD5 310 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 SPPL2AQ8TCT8 520 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 UBTD2Q8WUN7 234 aa8.19□□□□□ -1.1
SMAD3-203ENST00000537194 UCN3Q969E3 161 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms