RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 FAM129AQ9BZQ8 928 aa8.42□□□□□ -1.06
CPSF7-217ENST00000537162 OR10A4Q9H209 315 aa8.42□□□□□ -1.06
CPSF7-217ENST00000537162 CLK4Q9HAZ1 481 aaKnown RBP8.42□□□□□ -1.06
CPSF7-217ENST00000537162 CCDC177Q9NQR7 707 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-217ENST00000537162 ACSS1Q9NUB1 689 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-217ENST00000537162 IKZF3Q9UKT9 509 aa8.42□□□□□ -1.06
CPSF7-217ENST00000537162 SPEF1Q9Y4P9 236 aa8.42□□□□□ -1.06
CPSF7-217ENST00000537162 HERC2O95714 4834 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 LRRC53A6NM62 1247 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 G3V4G9 280 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 CYR61O00622 381 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 DYRK3O43781 588 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 LILRA1O75019 489 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 LDB3O75112 727 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 NIPSNAP2O75323 286 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 AVPP01185 164 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 CATP04040 527 aaKnown RBP8.41□□□□□ -1.06
CPSF7-217ENST00000537162 KRT1P04264 644 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 MDKP21741 143 aaPredicted RBP8.41□□□□□ -1.06
CPSF7-217ENST00000537162 GCH1P30793 250 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 GCKP35557 465 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 PTGDSP41222 190 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 NR2C2P49116 596 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 SUCLG1P53597 346 aaKnown RBP8.41□□□□□ -1.06
CPSF7-217ENST00000537162 RAB38P57729 211 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 SPOCK1Q08629 439 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 RPS6KA2Q15349 733 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 TOR1AIP1Q5JTV8 583 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 NIPAL1Q6NVV3 410 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 TRIM40Q6P9F5 258 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 AFTPHQ6ULP2 937 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 C17orf64Q86WR6 236 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 DND1Q8IYX4 353 aaKnown RBP8.41□□□□□ -1.06
CPSF7-217ENST00000537162 ANKRD53Q8N9V6 530 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 MLKLQ8NB16 471 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 OR4L1Q8NH43 312 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 ZBTB8AQ96BR9 441 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 SORCS2Q96PQ0 1159 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 PANX3Q96QZ0 392 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 HBEGFQ99075 208 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 PINK1Q9BXM7 581 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 RASSF4Q9H2L5 321 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 FOLH1BQ9HBA9 442 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 GALNT9Q9HCQ5 603 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 FAM114A2Q9NRY5 505 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 COPS7AQ9UBW8 275 aa8.41□□□□□ -1.06
CPSF7-217ENST00000537162 AAR2Q9Y312 384 aaKnown RBP8.41□□□□□ -1.06
CPSF7-217ENST00000537162 RYR1P21817 5038 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 ARFGEF3Q5TH69 2177 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 LOC105371242A0A075B767 164 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 ABCD4O14678 606 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 TP53I11O14683 189 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 CST8O60676 142 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 CTNSO60931 367 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 CLDN9O95484 217 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 SLC6A8P48029 635 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 SLC37A1P57057 533 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 RGS1Q08116 209 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 GPS1Q13098 491 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 PON3Q15166 354 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 DPCR1Q3MIW9 517 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 BBS9Q3SYG4 887 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 MBOAT1Q6ZNC8 495 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 CDKL3Q8IVW4 592 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-217ENST00000537162 REXO1L1PQ8IX06 675 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 ZNF595Q8IYB9 648 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 PRR22Q8IZ63 422 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 WDSUB1Q8N9V3 476 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 OR4K1Q8NGD4 311 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 MRAPQ8TCY5 172 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 PPWD1Q96BP3 646 aaKnown RBP8.4□□□□□ -1.06
CPSF7-217ENST00000537162 ALS2CR12Q96Q35 445 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 PANX2Q96RD6 677 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 SNX18Q96RF0 628 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 TTC1Q99614 292 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 DHRS9Q9BPW9 319 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 SUCNR1Q9BXA5 334 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 WWTR1Q9GZV5 400 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 GAR1Q9NY12 217 aaKnown RBP8.4□□□□□ -1.06
CPSF7-217ENST00000537162 TAS2R10Q9NYW0 307 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 NPAP1Q9NZP6 1156 aa8.4□□□□□ -1.06
CPSF7-217ENST00000537162 FEZ2Q9UHY8 353 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-217ENST00000537162 PTBP2Q9UKA9 531 aaKnown RBP8.4□□□□□ -1.06
CPSF7-217ENST00000537162 PLCE1Q9P212 2302 aa8.4□□□□□ -1.07
CPSF7-217ENST00000537162 NPIPA5A0A0B4J1W7 369 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 LOC390937A0A1W2PQ73 354 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 TRBC2A0A5B9 178 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 B4DXG7 233 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 NPIPA7E9PJI5 369 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 GCM2O75603 506 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-217ENST00000537162 CLPSP04118 112 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 HSP90AA1P07900 732 aaKnown RBP8.39□□□□□ -1.07
CPSF7-217ENST00000537162 TACSTD2P09758 323 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 NPIPA8P0DM63 369 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 NPPBP16860 134 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 ATP5DP30049 168 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 SKIV2L2P42285 1042 aaKnown RBP8.39□□□□□ -1.07
CPSF7-217ENST00000537162 KCNC1P48547 511 aa8.39□□□□□ -1.07
CPSF7-217ENST00000537162 FABP6P51161 128 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms