RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TMEM168Q9H0V1 697 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 NTMQ9P121 344 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 TRPC4Q9UBN4 977 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 WARS2Q9UGM6 360 aaKnown RBP12.82□□□□□ -0.36
SMG6-203ENST00000536871 APOBEC3BQ9UH17 382 aaKnown RBP12.82□□□□□ -0.36
SMG6-203ENST00000536871 MTCH2Q9Y6C9 303 aa12.82□□□□□ -0.36
SMG6-203ENST00000536871 C2CD4DB7Z1M9 353 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 BTN3A3O00478 584 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 AXIN1O15169 862 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 H1F0P07305 194 aaKnown RBP12.81□□□□□ -0.36
SMG6-203ENST00000536871 OR12D1P0DN82 309 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 CERS1P27544 350 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 MAPK10P53779 464 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 TNFRSF17Q02223 184 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 COX10Q12887 443 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 PRRT3Q5FWE3 981 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 SYT6Q5T7P8 510 aaPredicted RBP12.81□□□□□ -0.36
SMG6-203ENST00000536871 Q6ZNX1 250 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 VN1R4Q7Z5H5 301 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 ENTHD1Q8IYW4 607 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 AMER3Q8N944 861 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 RHOXF1Q8NHV9 184 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 XAGE5Q8WWM1 108 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 RERGQ96A58 199 aaPredicted RBP12.81□□□□□ -0.36
SMG6-203ENST00000536871 COL21A1Q96P44 957 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 OR2A14Q96R47 310 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 PINK1Q9BXM7 581 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
SMG6-203ENST00000536871 LYRM4Q9HD34 91 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 ACTR10Q9NZ32 417 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 C5AR2Q9P296 337 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 FBXW2Q9UKT8 454 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 CHD7Q9P2D1 2997 aa12.81□□□□□ -0.36
SMG6-203ENST00000536871 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 A0A0G2JN53 185 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SH3PXD2BA1X283 911 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 PRAMEF25A6NGN4 478 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 B3GALT2O43825 422 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 B4GALT2O60909 372 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SOX30O94993 753 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SMIM10L1P0DMW3 83 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 UGT2B7P16662 529 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 FMO3P31513 532 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 KRT20P35900 424 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 RPS26P62854 115 aaKnown RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 BTN3A2P78410 334 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 EMX1Q04741 257 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 PUM1Q14671 1186 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMG6-203ENST00000536871 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 FIGLAQ6QHK4 219 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SZRD1Q7Z422 152 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 FLVCR1-AS1Q8TAF5 88 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 FAR1Q8WVX9 515 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 RAB8BQ92930 207 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 CNRIP1Q96F85 164 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 SMIM10Q96HG1 83 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 TRNT1Q96Q11 434 aaKnown RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 OR2A5Q96R48 311 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 ZFYVE21Q9BQ24 234 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 TMEM121BQ9BXQ6 578 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 NMNAT1Q9HAN9 279 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 TMEM165Q9HC07 324 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 NECTIN3Q9NQS3 549 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SLC2A4RGQ9NR83 387 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 ENPP5Q9UJA9 477 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 CHD9Q3L8U1 2897 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 A0A1W2PRQ8 180 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 H0Y8X5 98 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SLC22A1O15245 554 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 XPNPEP2O43895 674 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 PCDHGA12O60330 932 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 ZNF217O75362 1048 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 BCL10O95999 233 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 TNFRSF1BP20333 461 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 NFATC3Q12968 1075 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SMAD4Q13485 552 aaKnown RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 DGCR6Q14129 220 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 MAPK11Q15759 364 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SLC44A2Q8IWA5 706 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 LRRC25Q8N386 305 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 OR52J3Q8NH60 311 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 C9orf43Q8TAL5 461 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 UTP15Q8TED0 518 aaKnown RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 HMGB4Q8WW32 186 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 TRUB1Q8WWH5 349 aaKnown RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 ELP4Q96EB1 424 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 Q96MT0 163 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 ZNF681Q96N22 645 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 DGCR6LQ9BY27 220 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 ACTRT3Q9BYD9 372 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 PTGFRNQ9P2B2 879 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 CPNE7Q9UBL6 633 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 SLC13A4Q9UKG4 626 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 PNMA8BQ9ULN7 279 aaPredicted RBP12.8□□□□□ -0.36
SMG6-203ENST00000536871 RNF6Q9Y252 685 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 PCDHGA10Q9Y5H3 936 aa12.8□□□□□ -0.36
SMG6-203ENST00000536871 CLCA1A8K7I4 914 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms